Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2152 |
Symbol | dusC |
ID | 6987621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2309269 |
End bp | 2310216 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380438 |
Product | tRNA-dihydrouridine synthase C |
Protein accession | YP_002263522 |
Protein GI | 209695593 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTAA TACTAGGCCC TATGGAGGGC GTACTCGATC ACTTAATGCG TGAACTATTA ACAGAAATTA ACGACTATGA TTTCTGTGTT ACTGAGTTTG TGCGCATCGT TGATCAACTT TTACCTCCTC ATGTATTCCA CCGAATCTGT CCGGAATTAC ATAACGACAG TAAAACCAAA TCAGGTACCC CTATTCGTCT ACAATTATTA GGACAAGAAC CTAATTGGAT GGCAGAAAAC GCGGCACGAG CAATTGATCT TGGTTCTGAT GGTCTTGATT TAAACTTTGG TTGCCCAGCA AAAGCGGTAA ACAAAAGTCG GGGCGGAGCT GCGCTTTTAA AAGATCCTGA ATTAATTTAT CAAATCGTTA AAGCGTGTCG TGAAGCAGTA CCACAAGATA AAAAAGTCAC TGCAAAAATT CGCTTAGGTT GGGAGAATCC CGAAGAATGT TTTGCTATTG CCGATGCGAT AAAACAAGCT GGCGCAAACG AATTAACCAT CCATGCGCGC ACTAAAACTG ATGGCTATCG TGCAGAAGAA ATAAAATGGG ATTACATCAA CCAAGTTCGC CAAAAAATAG ATATTCCTAT TATCGCTAAT GGTGAAATTT GGAACTATGC CGATGGACAA CGTTGTATTG CCGCCACAGG AATTGATTCG TTAATGGTGT GCCGAGGCGC ATTTAATATG CCAAACCTTG GGAACGTAGT GAAACACAAT CACCCGAAAA TGCCGTGGCC AGAAGTGATT GCATTATTAA TTCATTATTC AAAATTACAA ATGGCTGGTG ATAAAGGCCA GTATTATGCA AACAGAGTAA AACAATGGCT AGTTTATCTT CGACAAGAAT ATACTGAAGC TAAAGATATT TTCATGGATA TTCGAAGCCA TAAAAAAGCG CCTTTAATTG TAGAGCGCTT AAATCAAGAA TTAGAGAACG TTAGTTAA
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Protein sequence | MQVILGPMEG VLDHLMRELL TEINDYDFCV TEFVRIVDQL LPPHVFHRIC PELHNDSKTK SGTPIRLQLL GQEPNWMAEN AARAIDLGSD GLDLNFGCPA KAVNKSRGGA ALLKDPELIY QIVKACREAV PQDKKVTAKI RLGWENPEEC FAIADAIKQA GANELTIHAR TKTDGYRAEE IKWDYINQVR QKIDIPIIAN GEIWNYADGQ RCIAATGIDS LMVCRGAFNM PNLGNVVKHN HPKMPWPEVI ALLIHYSKLQ MAGDKGQYYA NRVKQWLVYL RQEYTEAKDI FMDIRSHKKA PLIVERLNQE LENVS
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