Gene VSAL_I2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2152 
SymboldusC 
ID6987621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2309269 
End bp2310216 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content40% 
IMG OID643380438 
ProducttRNA-dihydrouridine synthase C 
Protein accessionYP_002263522 
Protein GI209695593 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAA TACTAGGCCC TATGGAGGGC GTACTCGATC ACTTAATGCG TGAACTATTA 
ACAGAAATTA ACGACTATGA TTTCTGTGTT ACTGAGTTTG TGCGCATCGT TGATCAACTT
TTACCTCCTC ATGTATTCCA CCGAATCTGT CCGGAATTAC ATAACGACAG TAAAACCAAA
TCAGGTACCC CTATTCGTCT ACAATTATTA GGACAAGAAC CTAATTGGAT GGCAGAAAAC
GCGGCACGAG CAATTGATCT TGGTTCTGAT GGTCTTGATT TAAACTTTGG TTGCCCAGCA
AAAGCGGTAA ACAAAAGTCG GGGCGGAGCT GCGCTTTTAA AAGATCCTGA ATTAATTTAT
CAAATCGTTA AAGCGTGTCG TGAAGCAGTA CCACAAGATA AAAAAGTCAC TGCAAAAATT
CGCTTAGGTT GGGAGAATCC CGAAGAATGT TTTGCTATTG CCGATGCGAT AAAACAAGCT
GGCGCAAACG AATTAACCAT CCATGCGCGC ACTAAAACTG ATGGCTATCG TGCAGAAGAA
ATAAAATGGG ATTACATCAA CCAAGTTCGC CAAAAAATAG ATATTCCTAT TATCGCTAAT
GGTGAAATTT GGAACTATGC CGATGGACAA CGTTGTATTG CCGCCACAGG AATTGATTCG
TTAATGGTGT GCCGAGGCGC ATTTAATATG CCAAACCTTG GGAACGTAGT GAAACACAAT
CACCCGAAAA TGCCGTGGCC AGAAGTGATT GCATTATTAA TTCATTATTC AAAATTACAA
ATGGCTGGTG ATAAAGGCCA GTATTATGCA AACAGAGTAA AACAATGGCT AGTTTATCTT
CGACAAGAAT ATACTGAAGC TAAAGATATT TTCATGGATA TTCGAAGCCA TAAAAAAGCG
CCTTTAATTG TAGAGCGCTT AAATCAAGAA TTAGAGAACG TTAGTTAA
 
Protein sequence
MQVILGPMEG VLDHLMRELL TEINDYDFCV TEFVRIVDQL LPPHVFHRIC PELHNDSKTK 
SGTPIRLQLL GQEPNWMAEN AARAIDLGSD GLDLNFGCPA KAVNKSRGGA ALLKDPELIY
QIVKACREAV PQDKKVTAKI RLGWENPEEC FAIADAIKQA GANELTIHAR TKTDGYRAEE
IKWDYINQVR QKIDIPIIAN GEIWNYADGQ RCIAATGIDS LMVCRGAFNM PNLGNVVKHN
HPKMPWPEVI ALLIHYSKLQ MAGDKGQYYA NRVKQWLVYL RQEYTEAKDI FMDIRSHKKA
PLIVERLNQE LENVS