| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2132 |
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| Symbol | torT |
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| ID | 6987610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2281368 |
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| End bp | 2282363 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380414 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_002263502 |
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| Protein GI | 209695573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.201877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATCA AAGCAATCTC CCTATTTATT ACCTTGATTT CAATACTGTT ATCCCCTCTA
TCTTACGCTA AAGCGCCTTG GAAGATTTGT GCCATCTATC CGCATTTAAA AGATTCTTAT
TGGTTGTCTA TCAACTATGG CATGGTTGAA GAGGCAAAAC GCAATAATGT CGAATTAACC
GTTTATGAAT CTGGTGGTTA TCCCAATATT GATCGCCAAA AAGAACAAAT TAAACAATGT
ATTGAAATAG GCTCTAACGC CATTTTATTA GGTACGGTTG ATCCTATCGC CTATCAAGAT
AATTTCAGAC AATTGACTCA AGGTATCCCA ACATTTGCAA CAGTAAACCA ACTGAAAAGC
TCAACAGGTA AATTACCCCC TCTTCATTTT GGTGAAGTCG GTGTTGATTG GTATGACATG
GGTTATCAAG CCGGGGCTTT CTTAGCCAAG CTGCATCCTA GAGATTCAGG TATTGTTCAT
ATTGGTTGGC TACCTGGGCC TAAAACCCGA GGCGGTACAA AGCCGGTAAC AAAAGGGTTT
TATGATGCAA TTAAAAACAG TGATGTCATT GTCAGTGCGA CTTATTGGGG CGATAACAGC
AAAGAATTAC AACGTAATTT AATACAAGAT GCGCTTGAAA ACGAAAAATT GGATTACCTT
GTCGGTGGTG CCGTTGCTAT TGAAGTCGCT ATTAGCGAGC TTGCTAGTCG AAAAATGCAA
GACGACGTTG GTTTAATATC GACGTATTTA AGTCATGCAG TTTATCGTGG GCTACTTCGT
AATAAAGTTC TCTTTTCTCC GACAGATAAA ATGGTATTAC AAGGCCGACT TAGTGTTCAA
CAGGCGATTG GATACTTAGA AAACCAACCG TTGCCGTTTG CTCTATCACC CAAAATTGAA
GCACTAACCC CAAATCATTT ACCAAAACGA GTACTATTAG ATTCTCTTTC GCCAGCAGAA
TATCGTCCAA CTTTTTTTGT GGGCGCAAAA AAATAA
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| Protein sequence | MKIKAISLFI TLISILLSPL SYAKAPWKIC AIYPHLKDSY WLSINYGMVE EAKRNNVELT
VYESGGYPNI DRQKEQIKQC IEIGSNAILL GTVDPIAYQD NFRQLTQGIP TFATVNQLKS
STGKLPPLHF GEVGVDWYDM GYQAGAFLAK LHPRDSGIVH IGWLPGPKTR GGTKPVTKGF
YDAIKNSDVI VSATYWGDNS KELQRNLIQD ALENEKLDYL VGGAVAIEVA ISELASRKMQ
DDVGLISTYL SHAVYRGLLR NKVLFSPTDK MVLQGRLSVQ QAIGYLENQP LPFALSPKIE
ALTPNHLPKR VLLDSLSPAE YRPTFFVGAK K
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