| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2131 |
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| Symbol | |
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| ID | 6987609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2278417 |
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| End bp | 2281293 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643380413 |
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| Product | response regulator, histidine kinase |
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| Protein accession | YP_002263501 |
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| Protein GI | 209695572 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.739788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTTT CTTCTACAGG CATAGGCCAA AAACTGTTCA TTACTTTCAC GGTGATGATT
GCGTTAATGG CGTTTGGTTC TGTTGTTGGC GTACTTGGTT TTTCATACGT AGAAAAAACA
GAAAGAACGG TGATTGACTC TGCGATTCCT GCAGTGATTG AAGCTCGATA TATTTCTGAT
TTAAGTACAA AAATCATTTC AACATCTCAA TTACTTTCGC AAGTAAATGT AGAAGATGAC
CGCAATAAAT ACGGAAAAGA ATTATTTAGC GCTATCGAAA GTTTATACGT TCGATTAAAA
GGCCTAGGTG TATACCCATT TGATAAAGCA TTGTTGTCAC GTCTTGATCA GCAAGTTCAA
GATATTGTCG ATAACTTAGC AACAATGGGG GATACCGTTG GTGAAAAAGT GGTATTACAC
CGTATTATCC AAGAAAAAAG CAAAAATCTA ACGCAAACAG CACTGCAATT AGAAGAACTT
GCTCGTTCAC AAGTACTTAA TTCAAATACG ATAACCATTG CTAATGTCGT TAAAATTTAC
GATCTTGTTG AAAATGGGAA TAAAAATGAC GTTTATGAGG CGCTTGATAC GTTAGTTGAA
ATTGATCTCG ATCTTGCGGA ACGTTTGCAT GAACTTCGTT TATTAACGTT TAAAGTGGTT
AATACTATTG ATGATGCAAG AAACAGTCAT TTAATTAGCC AAGTTGAAAA ACTGCGTCAA
GATTTTACTC GAGACATGAC GATTATCACT CGTCGAATAC AAGCGGTTGA AGATCCTAGT
CGCACAAAAC AAATGTTAGA TTTAGCCAGT AATTTAACCC ATAACCAACG TTTGTTCAGT
GAACTGATTA AATTAATTAA CTTAAATAAT GAATTGAAAG CATTAAGTGA TGAGAATATT
CATCAATTCC AAAGACTGAA TTTGACGATA GAACAACTGC TTAATCAAGC GAATGAAGTG
ACACAGCAAG CGGTGGCTGA TGTGAATTTT GTACTTAAAA TTGTACAGCA GTTATTAATA
TCCATAACTT TACTTGGCCT CTGCTTGGTT ATTTATATTA TGTGGCGATA CGTCTACGCT
CGTGTATTAA CACGTTTAAA TCAATACGAG AGAGCATTGA TGGATGTGGC CAATGGCAAA
CTGGATATTG AACTGGATAC ATCCGGTGAT GATGAGTTGG CTCAAATGGG ACGATCTATT
CTGGTGGCTC GTGATACGGC TCAAGAACTG CAAGAACATA AAGACAGTCT TGAGTTACAA
GTCGCTCAAC GAACTCAAGA ATTAAAATCC AGTAATGAAC GGTTAAATGT TGAAATTATT
AATCATGATA AAGCAAGAGA CTTGGCTGAA CAGGCTAACC GAGCAAAATC CGCGTTTTTA
GCCACGATGA GCCATGAGAT CCGAACGCCA CTTAATGGGG TATTGGGTAC CGGTGAACTA
TTACGAGGCA GTCGTTTAAC TGCTCAGCAA AAGCAATACG TCGATATTAT TAATCGAAGT
GGTGAGAACC TGCTCGATTT ATTGAACGAT ATTCTTGATT ATTCGAAAAT CGAGGCTGGG
CATTTATCGA TCAGAAAAAG TAACTTTAAT GTCCATTCTA TTGTTACTGA TGTCCATCAT
CTATTTAGTT CTAGAGCTCA ACAAAAAGGG ATCACCCTTG ATTTCAATAT TCCGCCAGAG
ACACCGTTGT GGTGGATTGG CGATTGTAGT CGTATTCGTC AGGTACTCAA TAATTTTGTG
GGTAATGCGA TTAAATTTAC GCATACAGGC AGTGTGTCTA TTCAGCTTCA CGTGATATTA
GAAACGACCT TATTGTTTGA AGTGATTGAT GCTGGTGCCG GTATTGCTGA GCATGAGATA
GACAGTTTAT TCGATGCCTT TACTCAAGCG GAAGAAGGCC AAAAAGTCAC GGGGGGGACG
GGGCTTGGTT TGGCTATTAG TCAACGATTA ATTGAAGCAA TGGAGGGTGA AATTGGTGTG
GATTCTAAAG AAGGGATCGG AAGTGCTTTT TGGTTCTCAT TGGAATTAGA AAAAGGACAT
CGCGTTGAAG TATCAAACGA AATATGTGCG ATTTCTGATT TAGCACCAGC TCATCTTCTT
TTAGTTGAAG ATAATCCTGT GAATCAAATG GTGGCCACTG GGTTCTTAGA AAGATTAGGC
CATAAAGTTA CCGCTGTTGA TACTGGGCAG TTAGCGGAAG AGCAAGTAAA AGAACATCAA
TTTGATATGT TGTTGTTGGA TATTAACTTA CCTGATACTG ATGGTGTGAC ATTACAAAAA
CGCTTAAGAG CGATTGAAAA TGAATATCAC GGAGAAGAGT GCTATACACC AACGTTAGCG
GTATCGGCTC ATGTATTTAC GGAAGATGTC GAAAGTTATT TAGCGGCAGG CTTTGATGGT
TTTTTGGGGA AACCGTTGGT TGAAAATCAA TTGGTTAAAA TGCTAAATCG TTTTTTAAGC
AAGGTTCCTT TAATACAGGA AATAGAGATG CTTCAAGAGG CATTAGCTCT TATTACTGAT
AATAATAGCA TTGAGGAAGC AGATGTGATT TTAAATGAGA AGGTTCTTCA ACGTGATCTG
GCTGTGTTAG GAGAGGTTAG AATGGCCAAG ATCATCGATC TATTTAGAGT GTCCTCTAAA
GATAATTTAG TTCAATTACA ACATGCGATT ATCAATAGAG ACGTGTATCA AGTGAACCAG
CTTGCACATA AATTAAAAGG ATCTGCGGGT AGTCTTGGTT TAATGAAATT ACACGCACTT
TGTCATTCTT ATGAAGAAAA AGGGAAAAGT GGTGATGTAT CTGGTTGTAG TGATATCGAA
ATTTCTCAGG TTTATGGACA ATCAATAGAG GCATTAAATA CATTTTTTGA TAAATGA
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| Protein sequence | MLFSSTGIGQ KLFITFTVMI ALMAFGSVVG VLGFSYVEKT ERTVIDSAIP AVIEARYISD
LSTKIISTSQ LLSQVNVEDD RNKYGKELFS AIESLYVRLK GLGVYPFDKA LLSRLDQQVQ
DIVDNLATMG DTVGEKVVLH RIIQEKSKNL TQTALQLEEL ARSQVLNSNT ITIANVVKIY
DLVENGNKND VYEALDTLVE IDLDLAERLH ELRLLTFKVV NTIDDARNSH LISQVEKLRQ
DFTRDMTIIT RRIQAVEDPS RTKQMLDLAS NLTHNQRLFS ELIKLINLNN ELKALSDENI
HQFQRLNLTI EQLLNQANEV TQQAVADVNF VLKIVQQLLI SITLLGLCLV IYIMWRYVYA
RVLTRLNQYE RALMDVANGK LDIELDTSGD DELAQMGRSI LVARDTAQEL QEHKDSLELQ
VAQRTQELKS SNERLNVEII NHDKARDLAE QANRAKSAFL ATMSHEIRTP LNGVLGTGEL
LRGSRLTAQQ KQYVDIINRS GENLLDLLND ILDYSKIEAG HLSIRKSNFN VHSIVTDVHH
LFSSRAQQKG ITLDFNIPPE TPLWWIGDCS RIRQVLNNFV GNAIKFTHTG SVSIQLHVIL
ETTLLFEVID AGAGIAEHEI DSLFDAFTQA EEGQKVTGGT GLGLAISQRL IEAMEGEIGV
DSKEGIGSAF WFSLELEKGH RVEVSNEICA ISDLAPAHLL LVEDNPVNQM VATGFLERLG
HKVTAVDTGQ LAEEQVKEHQ FDMLLLDINL PDTDGVTLQK RLRAIENEYH GEECYTPTLA
VSAHVFTEDV ESYLAAGFDG FLGKPLVENQ LVKMLNRFLS KVPLIQEIEM LQEALALITD
NNSIEEADVI LNEKVLQRDL AVLGEVRMAK IIDLFRVSSK DNLVQLQHAI INRDVYQVNQ
LAHKLKGSAG SLGLMKLHAL CHSYEEKGKS GDVSGCSDIE ISQVYGQSIE ALNTFFDK
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