Gene VSAL_I2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2108 
Symbol 
ID6987593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2256654 
End bp2257895 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content40% 
IMG OID643380393 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002263481 
Protein GI209695552 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.478337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTACAC CACAATCAAC CCACGTTGCC ATTATTGGTG CAGGCCCATC AGGGTCTATT 
GCTGCTGCGT TGCTTAAAAA GCACAATATC GATTGTATCG TACTAGAAAA ATCCACTTTT
CCTCGTTTTT CTATTGGCGA GAGTTTACTT CCTGCTTGCA TGGAATCAAT CAAAAAAGCA
GGCATGCTTG ATGCAGTAAA AAATGCTTCT TTTCAATACA AAAATGGCGC AGCATTTCAT
TTTAACGGCA CGTTTACTTC TTTTGATTTT ACTGAAAAAT TTTCAGACGG TGCTGGAACA
ACCTTTCAAG TTCAACGCGG TAATTTTGAT AAAGTGTTAG CTGATAGCGC TCAAGAGCAA
GGGGTTGAGA TCCGCTATCA ACATGAAATT ACACACGTTG ATGTCTCGCA ACCCAAAGCA
TTACTTTCTG TCCTTGATGC CGATGGTCAC CCTTATTACA TTGAAGCCGA TTTCATATTG
GATGCCAGTG GATTTGGTCG TGTGTTACCA AGGTTGTTAG AATTAGAAGA ACCTTCTTGT
CTCCCGCCAC GAAAAGCCAT TTTTACCCAT ATTATTGATA ATATTTCGAC TGAGAGTTAT
GACCGCGATA AAATATTAAT CTCAGTCCAC CCAACAAATA CTCAAGTCTG GTATTGGTTG
ATCCCATTCA GCAATGGAAC CTGCTCTTTT GGTGTCGTTG GTGAACCTGA GTTTTTTGAA
GGCTATTCAC AAGACAATAC AGAGGCACTG AAACAACTGG CGTTGGAAGA AGACAATTTA
AGAACCTTAT TAGTCAATGC TCAATACCCT AACCCTTGTG GAGAAATCAT GGGTTATTCT
GCTAATGTGA CCAAATTATT TGACCGAAAT TTTGCGCTAT TGGGGAATGC TGGTGAGTTT
TTAGACCCTG TCTTTTCATC TGGCGTAACC ATCGCGATGA AATCAGCAGA GTTAGCCGCT
GATTTATTAA TTAAGCAATT CAACCAAGAA GAGGTTGATT GGCAAGTTGA TTATTCAGAC
AAGCTAATGA AGGGCGTAAA TACATTTCGT TGTTATGTTG AAGGATGGTA TGAAGGCTCA
TTTCAGGACG TTATTTTTCA CGACGATCCA AACCCTAAGA TTAAACAAAT GATCTGTGCC
ATTTTAGCAG GCTATGCATG GGATGAAGAA AACCCGTTTG TCGCAGAACC AGAACGTCGT
TTGAAAGTTA TTGCTGAACT ATGTAAACCT GTAACTAAAT AA
 
Protein sequence
MSTPQSTHVA IIGAGPSGSI AAALLKKHNI DCIVLEKSTF PRFSIGESLL PACMESIKKA 
GMLDAVKNAS FQYKNGAAFH FNGTFTSFDF TEKFSDGAGT TFQVQRGNFD KVLADSAQEQ
GVEIRYQHEI THVDVSQPKA LLSVLDADGH PYYIEADFIL DASGFGRVLP RLLELEEPSC
LPPRKAIFTH IIDNISTESY DRDKILISVH PTNTQVWYWL IPFSNGTCSF GVVGEPEFFE
GYSQDNTEAL KQLALEEDNL RTLLVNAQYP NPCGEIMGYS ANVTKLFDRN FALLGNAGEF
LDPVFSSGVT IAMKSAELAA DLLIKQFNQE EVDWQVDYSD KLMKGVNTFR CYVEGWYEGS
FQDVIFHDDP NPKIKQMICA ILAGYAWDEE NPFVAEPERR LKVIAELCKP VTK