Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2108 |
Symbol | |
ID | 6987593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2256654 |
End bp | 2257895 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380393 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_002263481 |
Protein GI | 209695552 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.478337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTACAC CACAATCAAC CCACGTTGCC ATTATTGGTG CAGGCCCATC AGGGTCTATT GCTGCTGCGT TGCTTAAAAA GCACAATATC GATTGTATCG TACTAGAAAA ATCCACTTTT CCTCGTTTTT CTATTGGCGA GAGTTTACTT CCTGCTTGCA TGGAATCAAT CAAAAAAGCA GGCATGCTTG ATGCAGTAAA AAATGCTTCT TTTCAATACA AAAATGGCGC AGCATTTCAT TTTAACGGCA CGTTTACTTC TTTTGATTTT ACTGAAAAAT TTTCAGACGG TGCTGGAACA ACCTTTCAAG TTCAACGCGG TAATTTTGAT AAAGTGTTAG CTGATAGCGC TCAAGAGCAA GGGGTTGAGA TCCGCTATCA ACATGAAATT ACACACGTTG ATGTCTCGCA ACCCAAAGCA TTACTTTCTG TCCTTGATGC CGATGGTCAC CCTTATTACA TTGAAGCCGA TTTCATATTG GATGCCAGTG GATTTGGTCG TGTGTTACCA AGGTTGTTAG AATTAGAAGA ACCTTCTTGT CTCCCGCCAC GAAAAGCCAT TTTTACCCAT ATTATTGATA ATATTTCGAC TGAGAGTTAT GACCGCGATA AAATATTAAT CTCAGTCCAC CCAACAAATA CTCAAGTCTG GTATTGGTTG ATCCCATTCA GCAATGGAAC CTGCTCTTTT GGTGTCGTTG GTGAACCTGA GTTTTTTGAA GGCTATTCAC AAGACAATAC AGAGGCACTG AAACAACTGG CGTTGGAAGA AGACAATTTA AGAACCTTAT TAGTCAATGC TCAATACCCT AACCCTTGTG GAGAAATCAT GGGTTATTCT GCTAATGTGA CCAAATTATT TGACCGAAAT TTTGCGCTAT TGGGGAATGC TGGTGAGTTT TTAGACCCTG TCTTTTCATC TGGCGTAACC ATCGCGATGA AATCAGCAGA GTTAGCCGCT GATTTATTAA TTAAGCAATT CAACCAAGAA GAGGTTGATT GGCAAGTTGA TTATTCAGAC AAGCTAATGA AGGGCGTAAA TACATTTCGT TGTTATGTTG AAGGATGGTA TGAAGGCTCA TTTCAGGACG TTATTTTTCA CGACGATCCA AACCCTAAGA TTAAACAAAT GATCTGTGCC ATTTTAGCAG GCTATGCATG GGATGAAGAA AACCCGTTTG TCGCAGAACC AGAACGTCGT TTGAAAGTTA TTGCTGAACT ATGTAAACCT GTAACTAAAT AA
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Protein sequence | MSTPQSTHVA IIGAGPSGSI AAALLKKHNI DCIVLEKSTF PRFSIGESLL PACMESIKKA GMLDAVKNAS FQYKNGAAFH FNGTFTSFDF TEKFSDGAGT TFQVQRGNFD KVLADSAQEQ GVEIRYQHEI THVDVSQPKA LLSVLDADGH PYYIEADFIL DASGFGRVLP RLLELEEPSC LPPRKAIFTH IIDNISTESY DRDKILISVH PTNTQVWYWL IPFSNGTCSF GVVGEPEFFE GYSQDNTEAL KQLALEEDNL RTLLVNAQYP NPCGEIMGYS ANVTKLFDRN FALLGNAGEF LDPVFSSGVT IAMKSAELAA DLLIKQFNQE EVDWQVDYSD KLMKGVNTFR CYVEGWYEGS FQDVIFHDDP NPKIKQMICA ILAGYAWDEE NPFVAEPERR LKVIAELCKP VTK
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