Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2100 |
Symbol | |
ID | 6987585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2250711 |
End bp | 2252084 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380385 |
Product | hypothetical protein |
Protein accession | YP_002263473 |
Protein GI | 209695544 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTACA CATCACTTTC TCATCTGACA TTACAATCTA ATGCCTCTCA TTCCGTGTGT TTCGATGAAC AACATAACGT TACTGGTTAT GAAAAGTTTC AACAAGACGT TCAAATTTTC AGTGCGTATT TAAGTGATAA ACCTCAGAGA AAATGGGCGC TGTGTTTTGA AAATAGCTAT GCTTTTTCTG TGGCGTTTAT GGCATTGGCT CATGCGGGTA AGCATCTTAT TTTACCAGGA AATCATCAAC CCGCAGCCTT GACTGAATTG GCTCAACATT TTGATGCATT ATTGCATGAT GACATTATTG AAACGATGCC TTGTGAGATC CATATTAACT ACAATGCGGT AGATTTATCG ATTCAACATA CGGAAAAACT ATCTCCTCTT TCTTTGTGTG ATATCCCGTT AACGCTGTTT ACATCGGGCT CAACCGATAC CCCTAAACCC ATTAATAAGA CCCTGCAATT ATTGGATAAC GAAATACAAC AATTAGAATT GTTGTGGGGT GAAAAAGTCA AAGACTCAGA ATGTTATAGC ACCGTTTCTC ATCAACATAT TTATGGCTTG TTGTTCCGAG TACTGTGGCC ATTGTGTTCA GGACGCGCGT TTAGCCAAAC AAATTTCATT TATCCTGAGC AAATTTTATC TCATCACTCA TCACATCCAA AGACCTTGGT TTGTAGTCCC GCATTATTAA AACGTCTTAT TGACCATGAA GGCTATAATG AGTATCAGGT GGTATTTTCT TCGGGTGGCC CATTAGCGAT TGAAGGCGCG GATCAAAGTG AGGCTAAATT ATCATCACGA CCATTTGAAG TATATGGCAG TACAGAAACG GGTGGGGTGG GTTATCGCCA GCAAACCGAA CCCTGTTCAT TGTGGACGTT TTTTCCGTCT CATCAAGCGC GCTTGAATAT TGAGCATTGT TTGGAATTAT TGTCTCCGTT CATTGATGAC GCACTATGGT ACCCAACGAG CGATTATTGT GATTTGCTTG AAAATGGTCA ATTTATGTTG AAAGGCCGAG TTGATCGAGT CATTAAAATT GAAGAAAAGC GTCTTTCATT AACGGAAGTT GAGAAACGTT TAACACAATT AATATGGATA GATGACGCCG CCGTTATTTC GATGGAAGAA GAAAAGCGCA CTGTTTTAGG TGCTGTTATT GTGCTTTCTG ACGCTGGGAA CGAATTAATG CAACAGGGGT CAAAAGGGAA GTTTTGGCTC AAATTACGCT CTGAACTGAG AGAATGGTTA GAACCAGTAG GGATCCCTAG ACGATTCAGA GCGGTAGATG AAGTTCCATT AAATAGTCAA GGTAAGCGCC AAATGCGTGA TTTACAGCAG CTGTTTAATG ACATTAATGA TTAA
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Protein sequence | MTYTSLSHLT LQSNASHSVC FDEQHNVTGY EKFQQDVQIF SAYLSDKPQR KWALCFENSY AFSVAFMALA HAGKHLILPG NHQPAALTEL AQHFDALLHD DIIETMPCEI HINYNAVDLS IQHTEKLSPL SLCDIPLTLF TSGSTDTPKP INKTLQLLDN EIQQLELLWG EKVKDSECYS TVSHQHIYGL LFRVLWPLCS GRAFSQTNFI YPEQILSHHS SHPKTLVCSP ALLKRLIDHE GYNEYQVVFS SGGPLAIEGA DQSEAKLSSR PFEVYGSTET GGVGYRQQTE PCSLWTFFPS HQARLNIEHC LELLSPFIDD ALWYPTSDYC DLLENGQFML KGRVDRVIKI EEKRLSLTEV EKRLTQLIWI DDAAVISMEE EKRTVLGAVI VLSDAGNELM QQGSKGKFWL KLRSELREWL EPVGIPRRFR AVDEVPLNSQ GKRQMRDLQQ LFNDIND
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