Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2082 |
Symbol | |
ID | 6987570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2233560 |
End bp | 2235284 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643380369 |
Product | putative helicase (DEAD/DEAH box helicase) |
Protein accession | YP_002263457 |
Protein GI | 209695528 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATACGT TACGTCCTTA TCAACAAGAT TCAGTCAAAG CCGTTATTCA TTATTTCCGA AAACACACCA GCCCTGCGGT ATTAGTGTTG CCGACGGGTG CCGGTAAAAG TTTGGTGATT GCTGAGTTGG CACGCATTGC TAAAGGTCGT GTATTGGTCA TGGCTCACGT AAAAGAATTG GTTGAGCAAA ACCATGAAAA ATACGAAGGG TACGGCGAAG AAGCCTCTAT ATTTTCAGCA GGATTAGGGC GTAAAGAAAC CGATAAAAAA GTGGTTTTTG CCTCGGTACA ATCAGTGGTT CGTAATCTTA ACTCGTTCAA AGATCAGTTT TCTCTGCTCG TCATTGATGA ATGCCACCGA GTGCCTGACA ACAAAGACAC CAGTTACCGT AAAGTTATCG AACATCTGCA AACCCAAAAT TCTGGCATTA AAGTGCTTGG CTTAACTGCC ACCCCTTATC GTTTAGGCAT TGGTTGGATT TATCAATATC ACACTCGTGG ACAAGTCAAA ACCGACACGC CTCGTTTTTT CCGTGATTGT ATTTTTGAGT TACCAATTCA ATATCTATTG GATGAGGGCT TTTTAACCCC TGCAAAATTA TTGGATGCCC CAATTTTAAG CTACGACTTT TCTCAGTTAA AACCCGCCTC AACGGGTCGT TATAAAGAAT CAGAATTGGA TCTGGTGATT GAAGAATCGA AACGCGCAAC ACCTCAAATT GTTCAACAAA TCATTGAATA TGCCAAAGAC AGAAAAGGCG TGATGATTTT TGCGGCAACA GTTCGTCATG CTCAAGAAAT ATTATCATTA CTGCCACCAG AGCAATCCGA ATTGGTGATT GGCGATACCA AAGTGATTGA ACGTGATGCC ATTATCCAAC GCTTCAAACA ACAACAAACC AAGTTTTTGG TTAATGTGTC GGTATTAACA ACCGGATTTG ATGCGCCTCA TGTCGATCTC ATTGCTATTT TACGTCCAAC CGAATCCGTC AGTTTGTACC AACAAATTGT CGGGCGAGGG TTACGTTTAG CTGAAGGGAA AACAGAATGT ACTATTTTGG ATTACGCGGG GAATTGCTAT GATCTCTACC AACCAGAGGT CGGTGATCCT AAACCTGACA GTAACAGCGA AATAATCACG ATTCCCTGCC CTGCTTGCGG TTTTAACAAT AATTTCTGGG GTAAATTAGA CAGTAATGGG TTTTTACTGG AACATTTTGG TCGTCGTTGC CAAGGCTATT TTGAAGACGA TGAAGGCACA CGTGAAGAGT GTGGCTATCG CTTTAGAGCT AAATACTGTA ACGAGTGCGG TGCCGATAAC GACATTGCTG CACGTATCTG CCATGAATGT GATGCTATTT TAGTCGATCC AGATAAAAAA CTAAAAGAAG CCCTTAAACT AAAAGAAGCC CGTATTCTCA ACTGCATTGA TTTAACACTG ACCGCAGGAA AGAATCAGTT TGATAAGCCA CAAATTAAAG TCACGTATTC TGGTGATGAT GACTCTGAAT TGCATGAAGT GTGGCAACTG GGTACTAAGA AACAGAAGCA ATTATTTTTA AACAATTTTG TCCGCCCTCA TTTAGTCGAC AGGCATCGCC CATTTGAAGA AACAACAGCA ATAAAAATAG CGAATAGCCA ACACCGATTC CGTCCACCAA GCTTTGTTAT CGCTCGTAAG CAAGGCAAGT TTTGGTCTAT TCGCGATAAG ATTTTTGAAG AGTAA
|
Protein sequence | MYTLRPYQQD SVKAVIHYFR KHTSPAVLVL PTGAGKSLVI AELARIAKGR VLVMAHVKEL VEQNHEKYEG YGEEASIFSA GLGRKETDKK VVFASVQSVV RNLNSFKDQF SLLVIDECHR VPDNKDTSYR KVIEHLQTQN SGIKVLGLTA TPYRLGIGWI YQYHTRGQVK TDTPRFFRDC IFELPIQYLL DEGFLTPAKL LDAPILSYDF SQLKPASTGR YKESELDLVI EESKRATPQI VQQIIEYAKD RKGVMIFAAT VRHAQEILSL LPPEQSELVI GDTKVIERDA IIQRFKQQQT KFLVNVSVLT TGFDAPHVDL IAILRPTESV SLYQQIVGRG LRLAEGKTEC TILDYAGNCY DLYQPEVGDP KPDSNSEIIT IPCPACGFNN NFWGKLDSNG FLLEHFGRRC QGYFEDDEGT REECGYRFRA KYCNECGADN DIAARICHEC DAILVDPDKK LKEALKLKEA RILNCIDLTL TAGKNQFDKP QIKVTYSGDD DSELHEVWQL GTKKQKQLFL NNFVRPHLVD RHRPFEETTA IKIANSQHRF RPPSFVIARK QGKFWSIRDK IFEE
|
| |