Gene VSAL_I2078 details

Gene Information

• Locus tag: VSAL_I2078
• Symbol: serC
• ID: 6987566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2228872
• End bp: 2229957
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643380365
• Product: phosphoserine aminotransferase
• Protein accession: YP_002263453
• Protein GI: 209695524
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG1932] Phosphoserine aminotransferase
• TIGRFAM ID: [TIGR01364] phosphoserine aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACACTA AATATAATTT TTCTGCAGGG CCTGCTGTTA TTCCTACGAG TGTTTTACAA 
CAAGTTCAAC ATGATATTCT TGATTGGAAA GGAACTGGAT TATCAATCAT GGGATTTAGC 
CATCGTAGTT CTGAGTTTAT GCAATTAGCA GAAGAGTCTG AAATGATATT ACGAGAACTA 
ATGGAGGTCC CTGATAATTA TCATGTCCTG TTTTGTCATG GTGGTGGAAG TGGTCAATTT 
TCAGCGGTTC CATTGAATTT GGTGGATAAG TCACAAACAG CGGATTATGT TGTTAGCGGT 
CATTGGTCAA AGTATGCAGC GATAGAGGCG AGTAAATTTT GTAAGGTTAA TACCATCAAT 
ATTGTTCAGA GAAATAATCA AAAGCAATCA CTCTTATCTC CCGTTGATTG GCAATTATCA 
CAGGATGCTC AGTATGTTTT CTTCTGTCCA AATGAAACGG TTGATGGGTT AGAGATTAAT 
GAATTGCCTA TTACAGATAA ACCAATAATT GCAGATATGT CTTCATTCAT ATTGTCACGC 
CCAATTGATG TTTCTAAATA TGGAATTATT TATGCGGGAG CTCAAAAAAA TATTGGTCCA 
GCAGGATTAA CGTTAGTTAT CATTCGTGAT GATTTATTGG GAAAAGTGAG TCGTGAAATA 
CCCACTATTT TTGATTATAA GGTATTGGCT GAAAATTATT CGATGCCAAA TACACCGCCA 
ACCTATCCAT GGTACGTTGC TAATGAAGTC TTTAAATGGC TTAAGGAGAT TGGCGGTGTA 
TCGGCTATTT ACAAGATAAA TATAGAAAAA GCAGCGTTAT TGTATGATGC AATTGATAAC 
TCAAGTTTAT ATATTAATCA TATAGATTCT GCCGCTCGTT CAATCATGAA TGTTCCATTT 
TATTTAAAGT CAGAAGCATT AACAGAAAAG TTTGTATCTC TTGCTCATAC TGCGGGACTT 
ACCTCCCTTA AGGGCCATAG CTCTGTCGGT GGTATTCGAG CATCAATCTA TAATGCGATG 
CCGATAGAGG GAGTAAAGAC ATTAGTAACT TTCATGAAGC AATTCGAAGA ACAATTCTAT 
AACTAA 

 

Protein sequence

MHTKYNFSAG PAVIPTSVLQ QVQHDILDWK GTGLSIMGFS HRSSEFMQLA EESEMILREL 
MEVPDNYHVL FCHGGGSGQF SAVPLNLVDK SQTADYVVSG HWSKYAAIEA SKFCKVNTIN 
IVQRNNQKQS LLSPVDWQLS QDAQYVFFCP NETVDGLEIN ELPITDKPII ADMSSFILSR 
PIDVSKYGII YAGAQKNIGP AGLTLVIIRD DLLGKVSREI PTIFDYKVLA ENYSMPNTPP 
TYPWYVANEV FKWLKEIGGV SAIYKINIEK AALLYDAIDN SSLYINHIDS AARSIMNVPF 
YLKSEALTEK FVSLAHTAGL TSLKGHSSVG GIRASIYNAM PIEGVKTLVT FMKQFEEQFY 
N