Gene VSAL_I2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2076 
Symbol 
ID6987564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp2227871 
End bp2228557 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID643380363 
Producthypothetical protein 
Protein accessionYP_002263451 
Protein GI209695522 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTGGTGTTGT AAACTCTGTA CTTGTTGGTA AAAGTGTTCC CTATGCGAAA 
GGTTCACAAA GTGCAATTAA TAAGAAACCA AAATCTGAAC GACAAGTAAC ATTACAATTA 
GGTTTTATTG ATGATGAGCA AGGTGATTTA CGAGTTCATG GAGGTATTGA AAAAGCGATT 
CATATATACC CAAGTGAGCA TTACGTTGAA TGGCAAAAAG AGCTAGAAGG TAATACAGCA 
TTACAAATGA TAGGGGCTTT TGGTGAGAAT ATCAGTTCAA CAGGGGTGAG TGAAGACACT 
ATTTGTTTGA ATGATAAAAT TAGAATTGGT TCGACATTGC TTGAAGTATC TCAAGGTCGA 
ATGCCATGTT GGAAGTTAAA TGTTAAGTTT AAACAAGATG ATATGGCGTT AAGATTGCAG 
GATTCATTAA GAACCGGGTG GTACTTTAGA GTATTAGAAA ACGGTGATAT TGGTAGTGGT 
GATGAGATAT TCCTTTGTGA TCGTCCTTAC CCTAAATGGC CTTTATCGAA AATAATGAAG 
TTAGTTTTTG AAGGGTGTTT AGATGAACAA GAGCTAAGCT CTTTATTGGA TTTACCGCTT 
GTAGAATCAT GGCATAGATT AGTGGCTAGA CGCTTAGAGA ATCAAAGCCT AGAAGATTGG 
TCTCCTCGAT TAGATGGACC TAAATAA
 
Protein sequence
MKKIGVVNSV LVGKSVPYAK GSQSAINKKP KSERQVTLQL GFIDDEQGDL RVHGGIEKAI 
HIYPSEHYVE WQKELEGNTA LQMIGAFGEN ISSTGVSEDT ICLNDKIRIG STLLEVSQGR 
MPCWKLNVKF KQDDMALRLQ DSLRTGWYFR VLENGDIGSG DEIFLCDRPY PKWPLSKIMK 
LVFEGCLDEQ ELSSLLDLPL VESWHRLVAR RLENQSLEDW SPRLDGPK