| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2066 |
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| Symbol | |
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| ID | 6987555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2215436 |
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| End bp | 2216650 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380353 |
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| Product | group II intron reverse transcriptase/maturase |
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| Protein accession | YP_002263442 |
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| Protein GI | 209695513 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTAC TGCAAGCGCT TTACGTGGCA TACAAACAAG TGAGAAAGAA TGGAGGTGCA
GCTGGTATTG ACGGGCAGCG TATCGATGAT TTCACACAAA ATTTGGAAGT AGAGCTCAGA
AAATTATTAC TTGAACTACA AGAAAAGCGC TATCAAGCGC GCCCCGTAAA ACGAGTTGAG
ATCGCCAAAG ACGATGGCGG TATCAGGTTA TTGGGGATCC CTACAGTTCG AGACCGAATT
GTTCAACAAT GTTTAACGAA TATAATGACT CCCATATTTG ACCCAAACTT TCATCCATCC
AGTTATGGAT ATCGGGTTGG GCGAAGCTGT CATCAAGCCA TCAGCAAAGC TACGCTCTTT
ATACGTAAAT ATAATAAGCA GCATGTTGTT GACATGGATC TGTCTAAATG CTTTGACATG
CTTGACCACG ATCTGATCAT CAAGTTCGTG CGAAAACGCA TCGTGGACGG CAGTATCTTA
GGCTTGATCC GTCAATTTCT AAAAAGTGGA GTCATGATTG GTGAAAATTG GCAGAATAGT
GTAATAGGCA GTCCACTACT TGCTAATATC TACTTAGATG AATTCGATCA AGAAATGATG
AGGCGTAAGC ATCGAATAGT GCGATACGCG GATGACATTT TGATATTCTG CACCTCGAAA
AAGGGAGCAG AGAATGCATT AAAAGTAGCT AGCCATATTT TAGAAGTAAC GCTAAAACTT
AAAGTGAATG AGCGGAAAAC CCATATAGCA CATAGCGATA CAGGTATTAA ATTCTTGGGA
GTGGAAATTT TCACAAATTA CACGGCAATT CAAGAAAAGA AGCTTAAAAC CTTAAAAGCG
AAAGTAAGAC AACTCACCAA GCGTAATGGA GGAGTGAATT TAGCGAGAGT GCTAAAGCAA
CTGAATCCAG TGCTCAGAGG GTTTGTAAAC TACTTCAAAA TAGCCAATAT TACGAGCACA
CTGAAAAGCC TTGCGGCTTG GATAAGGCGC AGATTGCGAG CGGTACAAAT GAGTTTGTGG
AAGAAGCCGT GCAGATTGCA TCGTCGTCTT AAGCAACTAA AGTACAAACC GCCATTTAAG
TCCATAAAAA TGAACTCATG GCGAAACAGT GCGAGTCCGT TAGCAAGCTA TGCGATGCCT
AATCAGTGTT TCAAAAGTCT AGGCTTGTAT TCAATAGATG AAGTTAAAAC AGGTGTACTC
GCTTCTTTTT ATTAA
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| Protein sequence | MLLLQALYVA YKQVRKNGGA AGIDGQRIDD FTQNLEVELR KLLLELQEKR YQARPVKRVE
IAKDDGGIRL LGIPTVRDRI VQQCLTNIMT PIFDPNFHPS SYGYRVGRSC HQAISKATLF
IRKYNKQHVV DMDLSKCFDM LDHDLIIKFV RKRIVDGSIL GLIRQFLKSG VMIGENWQNS
VIGSPLLANI YLDEFDQEMM RRKHRIVRYA DDILIFCTSK KGAENALKVA SHILEVTLKL
KVNERKTHIA HSDTGIKFLG VEIFTNYTAI QEKKLKTLKA KVRQLTKRNG GVNLARVLKQ
LNPVLRGFVN YFKIANITST LKSLAAWIRR RLRAVQMSLW KKPCRLHRRL KQLKYKPPFK
SIKMNSWRNS ASPLASYAMP NQCFKSLGLY SIDEVKTGVL ASFY
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