| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2058 |
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| Symbol | |
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| ID | 6988204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2205516 |
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| End bp | 2206457 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380345 |
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| Product | virulence protein VirC |
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| Protein accession | YP_002263434 |
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| Protein GI | 209695505 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATATT TTCCCATTTT TATGGATATA CGAAAGCGAC CAGTACTCGT CGTTGGTGGT
GGGGAAGTTG CTTGCCGTAA AATTGATATG TTATTGCAGG CGGATGCTGA TATCACGGTA
GTTGCTCCTT CAATTAAATC TTATTTAGCT GATTATGTGG AACAAGAAAA AATCCATTAC
CAGAAAGGAT TTTATCACCG CGATCTATTA GACAATAAAT ACGTACAGGT ATGGGCAACA
ACCGATAATG CTGACTTAAA TCATCAAGTT TATAAAGATG CCCACAACGT GGGGATCCTC
GTTAATGTGG TTGATGATAC TGCTCATTGT GATTTCATTA CCCCGTCAAT AGTGAACAGA
GGAAGAGTTC AAGTTGCGAT TTCTAGTGGT GGCGCTTCAC CTGTTTTGAT ACGAATAATT
AGAGAGCAAT TAGAGACTCA ATTATCAACA AAAATCGCAA TGTTAGCGGA TTTTGGTGCA
GACAAACGCA GTGTTGTTAA AGATGCATTT TCAACGGTGG ATGAACGACG TAAATTTTGG
GAAGCCTTTT TACGATCCCC TGAAATAGAA AAATTAAGCA CTAGAAATGA ATTGGAAGAT
TTATTCAGAT TCTATTTATC GTCATCGGTA AACGTACAGG CAGAGCGTAA TTGGATTGAG
TACCACAAAG AGACCGAGAT GTTGTCATTA AAGTCCCTGC GTTTAATGCA ACAAGCCGAA
TGGGTATTGT GCTTCTCTGA TTGCCCTGAT GAGTTTATAG AGCTTTGTCG TCGTGATGCT
GAGCGAATTT ACATTGATAC TGAAGCGGCT TTATTAGAGC GCTTACAAAA AGCAGAGAAA
GAAAAGATAA GAGTAACTGT ACTAGTGAAG AAAGGACGCT TACTCAGCAA CAATGAGTTA
CAAGGCTATA TGAGTAATGA TGTCTACGTA CCGACGTTGT AA
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| Protein sequence | MRYFPIFMDI RKRPVLVVGG GEVACRKIDM LLQADADITV VAPSIKSYLA DYVEQEKIHY
QKGFYHRDLL DNKYVQVWAT TDNADLNHQV YKDAHNVGIL VNVVDDTAHC DFITPSIVNR
GRVQVAISSG GASPVLIRII REQLETQLST KIAMLADFGA DKRSVVKDAF STVDERRKFW
EAFLRSPEIE KLSTRNELED LFRFYLSSSV NVQAERNWIE YHKETEMLSL KSLRLMQQAE
WVLCFSDCPD EFIELCRRDA ERIYIDTEAA LLERLQKAEK EKIRVTVLVK KGRLLSNNEL
QGYMSNDVYV PTL
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