Gene VSAL_I2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2057 
SymbolaapJ 
ID6988207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2204096 
End bp2205124 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content42% 
IMG OID643380344 
Productgeneral L-amino acid-binding periplasmic protein precursor 
Protein accessionYP_002263433 
Protein GI209695504 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.288114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA AATCAAACAC TCTATTCGCA GCGATTGCAA CCTCAGCGGC TCTATTGTCA 
ACACAAGCTA CTGCCGCTGA TGGAACCCTA GAAAAAGTAG TTAAGAATGG TTATCTACAA
TGTGGGGTTA GTACTGGTCT ACCTGGATTC TCAAACCCTA ACTCAAAAGG AGAATGGGAA
GGTATTGATG TTGAATACTG CCAAGCCGTT GCTGCTGCCG TATTAGGCGA TAAAACAAAA
GTTAAATACG TGCCATTAAC CGCAAAAGAG CGTTTTACTG CATTACAATC AGGTGAAATT
GATGTGCTGT CACGTAATAC AACATGGACA CTGCATCGTG ATACTTCCCT TGGCTTAAAT
TTTGTTGGCG TTAACTATTA CGATGGTCAA GGCTTTATGG TCAAAAAAGA ACTTGGTCTC
ACCAGTGCGA AAGAGCTTGA TGGTGCGTCT GTTTGTGTTC AATCAGGTAC CACTACCGAA
CTAAACCTTG CTGATTACTT CCGTAATAAC AGTATGGAAT ATAAGCCTGT CGTATTTGAT
ACGGCGGCAC AAACCTCGAA AGGATTTGAT GCTGGTCGAT GTGATGTACT AACCACTGAC
CAATCAGGTC TTTATGCTCT TCGCCTAAAT CTAAAAGACC CAAAAACAGC ACAAATTTTA
CCTGAAATCA TTTCAAAAGA GCCGCTAGGC CCTGTGGTTC GTCAAGGCGA CGATAAATGG
TTTAACATCA ACAAATGGGT GTTGAGCGCC ATGATAAACG CTGAAGAGTA TGGCATTACA
TCTGCAAATG CAGATCAAAT GCTTAAATCT AAAGATCCAA ACATCAAACG TATCCTTGGT
GTTGATGGTC CTAAAGGAAA AGGCTTAGGA ATTCGTGATG ATTGGGGTTA CCAAGTAATT
AAACAAGTGG GTAACTACGG AGAGAGCTTT GAGCGTACCG TTGGTACTGG TTCTCCACTT
CAAATATCTC GTGGCGTAAA TGCCCTTTGG AATGCGGGGG GCTTCATGTA CGCCGCACCA
ATCCGTTAA
 
Protein sequence
MNFKSNTLFA AIATSAALLS TQATAADGTL EKVVKNGYLQ CGVSTGLPGF SNPNSKGEWE 
GIDVEYCQAV AAAVLGDKTK VKYVPLTAKE RFTALQSGEI DVLSRNTTWT LHRDTSLGLN
FVGVNYYDGQ GFMVKKELGL TSAKELDGAS VCVQSGTTTE LNLADYFRNN SMEYKPVVFD
TAAQTSKGFD AGRCDVLTTD QSGLYALRLN LKDPKTAQIL PEIISKEPLG PVVRQGDDKW
FNINKWVLSA MINAEEYGIT SANADQMLKS KDPNIKRILG VDGPKGKGLG IRDDWGYQVI
KQVGNYGESF ERTVGTGSPL QISRGVNALW NAGGFMYAAP IR