Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2035 |
Symbol | |
ID | 6987529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2182127 |
End bp | 2183053 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643380325 |
Product | hypothetical protein |
Protein accession | YP_002263414 |
Protein GI | 209695485 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.268391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCATC TATCGTTTTT CTGGCTTTCT CACAATAAAG AAAAGGCGCT GGCCTCTCTA AGAACTGAGT TTAGTCAGTT AGCTGCTGAT ACTATCGCTT CGGGGAACAT CCAACTTCCT CCAATCCCTG ATGTCGTACT AAAAATACAA AAGCTATGTA CGCTAGAAGG TACCGTAATA AAAGAAGTCT CTGACACACT ATTAGAAGAC CCAAGCCTTA CCGCCATTGT CATTAGAATG GCCAATTCTG TTGTTTTTAA TCGACGAAAT ATCACTTGCA CCGATGTACT AACCGCCGTG TCTCGTTTAG GCATTTTCCG AGTACGTGAT ATTGTTACCG CTCAAGCGAT AGAACAACTC AAACACTCCA CCGATTTAAG CAAAGAATGT AATTCACTAT TAAGAAAAAG TGCGGCTCAA TCTCGTGAAT TTGCGGCAGT AATGACGATG GTCTGCCAAG AAATCATTAA TGAGAGCCAA GATGGAAATT TTTCTTATTT AGAACCAGAA AAAGCATTAT TGACGGGATT ACTTGCCGAT ATAGGCCTAT TTTGTCTAGT AAACGAATAT TACGATTATC TTGAAAAAGG CAATTACCTT GATCTCGATA TTGCCATGTA CATTTTTAAC AAAGAATGTA ATGACACTAG CTACCATATT TTAAATCACT GGCAATTTGA TGTGGATTTT TTATCGGTAG CAACGAATAT AAAGAAAGGA ACTAAAACAA ATTACTCCAT CAATTATTTG GACATTGCCC GTATTGCAAA CCATCTATTA TTGTTTAGAA ATAACGATGA CGCGATTAAT GAACACGATG TGGAAATTAC ACTTGAAGGT GCAGAAGCCC TTTATACGTT AAGTAATCTT ACAAATATGC AGTTCAAAGA CAGAATCAAA GAGACATTAA GAAGCAGTGG CTTGTAA
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Protein sequence | MNHLSFFWLS HNKEKALASL RTEFSQLAAD TIASGNIQLP PIPDVVLKIQ KLCTLEGTVI KEVSDTLLED PSLTAIVIRM ANSVVFNRRN ITCTDVLTAV SRLGIFRVRD IVTAQAIEQL KHSTDLSKEC NSLLRKSAAQ SREFAAVMTM VCQEIINESQ DGNFSYLEPE KALLTGLLAD IGLFCLVNEY YDYLEKGNYL DLDIAMYIFN KECNDTSYHI LNHWQFDVDF LSVATNIKKG TKTNYSINYL DIARIANHLL LFRNNDDAIN EHDVEITLEG AEALYTLSNL TNMQFKDRIK ETLRSSGL
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