Gene VSAL_I2031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2031 
SymbolhexR 
ID6988628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2177492 
End bp2178346 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content39% 
IMG OID643380321 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionYP_002263410 
Protein GI209695481 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0294963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA TTGAAAAAAT ACAAAATAAT CTAGATAACT TTAGTAAATC AGAACGTAAA 
GTTGCTGAAG TTATAATGGC ATCACCACAA ACTGCAATTC ATTCAAGTAT CGCAACCTTA
GCTAAAATGG CCGATGTTAG TGAGCCTACG GTTAACCGTT TTTGTCGCCG TCTTGATACT
AAAGGGTTTC CTGATTTTAA ACTTCACCTT GCTCAAAGTC TGGCAAACGG CACACCTTAT
GTAAATCGCA ATGTTGAAGA ACATGATGGA CCAGATGCGT ATACTCATAA GATTTTTGAA
TCGACAATGG CATGCCTTGA TGTTGCTAAA AACAGTCTTG ATCCAATGCA AATTAACCGT
GCTGTAGATT TGTTAACTCA AGCAAAGAAA ATTTCATTCT TTGGCTTAGG CGCTTCAGCA
TCCGTTGCTC ATGATGCCAT GAATAAATTC TTCCGTTTTA ACATTCCAAT CACTTGCTTT
GATGACATTG TAATGCAACG CATGAGCTGT ATTAATAGTA CAGAAAATGA TGTCGTTGTT
CTTATTTCTC ATACTGGTCG TACAAAGAGC TTGGTAGAAA TCGCAGAGCT GGCAAGATCA
AATGGTGCAA CCGTTATCGC CATTACTGCG AAAGAATCGC CATTAGAAAA AATGTCTTCT
CTAGCGATTT GTTTAGACGT TCCTGAAGAC ACTGACGTTT ATATGCCAAT GGCCAGCCGT
GTAGTGCAAA TGACGGTCAT TGATGTTCTA GCTACTGGCT TTACACTCCG CCGCGGTGCA
GGATTTAGAG ATAATTTAAA ACGCGTTAAA GAAGCACTTA AAGACTCACG CTTTGAAAAA
GAAAACCACT ATTAA
 
Protein sequence
MNTIEKIQNN LDNFSKSERK VAEVIMASPQ TAIHSSIATL AKMADVSEPT VNRFCRRLDT 
KGFPDFKLHL AQSLANGTPY VNRNVEEHDG PDAYTHKIFE STMACLDVAK NSLDPMQINR
AVDLLTQAKK ISFFGLGASA SVAHDAMNKF FRFNIPITCF DDIVMQRMSC INSTENDVVV
LISHTGRTKS LVEIAELARS NGATVIAITA KESPLEKMSS LAICLDVPED TDVYMPMASR
VVQMTVIDVL ATGFTLRRGA GFRDNLKRVK EALKDSRFEK ENHY