Gene VSAL_I2026 details

Gene Information

• Locus tag: VSAL_I2026
• Symbol: nhaA
• ID: 6987523
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2170673
• End bp: 2171821
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643380316
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_002263405
• Protein GI: 209695476
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.470958
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATG TTATTAAGAA TTTTTTCAAA TTAGAATCTG CAGGTGGGAT TCTTTTAGTG 
ATTGCAGCTG CAATTGCGAT GATTATTGCA AACTCTTCTT TTGCGCCAAT GTACGATACA 
TTTTTACATA CTTATCTTGG TGGCATGTCG GTGTCACATT GGATCAATGA TGGTCTAATG 
GCTGTTTTCT TCTTATTGAT AGGTCTTGAA GTTAAAAGAG AACTTCTTGA AGGCGCTCTT 
AAATCAAAAG AAACGGCTAT CTTCCCTGCA ATTGCTGCTG TTGGTGGCAT GCTTGCTCCT 
GCATTGGTTT ATGTTGCGTT TAATATGGGT GATCCAGAAG CGTTATCTGG TTGGGCTATT 
CCTGCTGCCA CTGATATTGC TTTTGCTTTA GGTATCATGG CATTACTTGG TAACCGAGTA 
CCTGTAAGCT TAAAAGTCTT TTTACTGGCA CTTGCAATCA TCGATGACCT CGGTGTTGTT 
GTAATTATTG CTTTCTTCTA TACCAGTGAT TTATCAGTAT TAGCACTTGT GATTGGCTTT 
GTAATGACGG GGATTTTATT CCTACTAAAT TCAAAGCATG TATCTAAAAT ACGTTGGTAT 
TTATTAGTTG GCTTTATTCT GTGGGTTAGT GTTTTACAAT CTGGAGTTCA TGCGACGTTA 
GCGGGTGTGG TATTAGGCTT TGCTATTCCT TTAAAAGGTA AAAAAGGCGA GCGTTCACCT 
CTAAAACACA TGGAACATGC ACTTCATCCA TATGTTGCTT TTGGTATTTT ACCGTTGTTT 
GCATTCGCGA ACGCAGGTAT TTCATTAGAT GGTGTGTCAT TAGATAGCTT GACGACAACA 
CTGCCACTGG GTGTCGCGTT AGGTCTGTTC TTAGGTAAGC CATTAGGTAT CTTTAGCTTT 
AGTTATGTTG CTGTGAAATC AGGTATTGCT AAGTTGCCTG CTGGAGTTAA CATGAAGCAC 
ATATTCGCGG TTTCAGTTCT TTGTGGTATC GGTTTTACAA TGTCGATCTT TATCTCATCA 
CTGGCATTTG GTGGTGCGAA CCCTGAATTT GATAAATTAG CTCGATTAGG CATCTTAATG 
GGATCAACCC TAGCGGCAGT TGTTGGTTAT ATTTTACTGC ACATTAGCCT ACCTAAAAAA 
GCAGCATAA 

 

Protein sequence

MSDVIKNFFK LESAGGILLV IAAAIAMIIA NSSFAPMYDT FLHTYLGGMS VSHWINDGLM 
AVFFLLIGLE VKRELLEGAL KSKETAIFPA IAAVGGMLAP ALVYVAFNMG DPEALSGWAI 
PAATDIAFAL GIMALLGNRV PVSLKVFLLA LAIIDDLGVV VIIAFFYTSD LSVLALVIGF 
VMTGILFLLN SKHVSKIRWY LLVGFILWVS VLQSGVHATL AGVVLGFAIP LKGKKGERSP 
LKHMEHALHP YVAFGILPLF AFANAGISLD GVSLDSLTTT LPLGVALGLF LGKPLGIFSF 
SYVAVKSGIA KLPAGVNMKH IFAVSVLCGI GFTMSIFISS LAFGGANPEF DKLARLGILM 
GSTLAAVVGY ILLHISLPKK AA