| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1997 |
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| Symbol | nrfA |
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| ID | 6987503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2138553 |
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| End bp | 2139989 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643380294 |
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| Product | cytochrome c552 |
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| Protein accession | YP_002263383 |
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| Protein GI | 209695454 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | [TIGR03152] formate-dependent cytochrome c nitrite reductase, c552 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGC AATGGACCCG TCGTTCAGCC GCTGCAATTG CCATGGTGAC TACGTTATTA
CTAAGTAGCC ACAGCTTTGC CGCTTCTGAA AAAACAGAGC GAGTTGACCC TCGCAACGAA
GCATATGCAA AACAACACGC CGATCAATAT GAATCTTGGC GTCCCACATC AGACAGCGTA
CAAATTGAAG ATGCTTTAGC AGAAGATCCA AACATGGTCA TTTTATGGGC CGGTTATGGG
TTTGCTAAAG ACTATAATAA AGCCCGTGGC CATTTCTATG CCATTGACGA TGTACGTGAA
ACTTTACGTA CTGCAGGCCC CACCGATGAA AACTCAGGTC CCATGCCGAT GGCATGTTGG
AGTTGTAAAA GCCCCGACGT TGGTCGTGTT ATTGAAGAGC AAGGCGAAGA TGGCTATTTC
TCAGGTAAAT GGGCACGTCT AGGCAGTGAA ATTCAAAACC CAATTGGGTG TGCCGATTGT
CATGACACTC GCAGTGAAGA GTTCAAAAAT GGTGGCCCTG CTTTAGCCAT CACAAAACCT
CATGTTGAAC GTGCAATGAA TGCGATTGGC AAGCCTTTCG ATGACCAATC TCGTTTAGAT
AAACAAGCCT CTGTTTGCGG TCAATGTCAT GTTGAATACT ATTTCACAGG TAAGACTAAA
GCCGTTAAGT TCCCTTGGGA TAAAGGGACA ACCGTTGATG AAATGGAAGA ATACTACGAC
GAAATTGGGT TTAGTGATTG GACACACAAA GTATCTAAAG CCCCTATGCT AAAAGCACAA
CATCCAGGCT ATGAAACATG GCGAGAAGGC ATTCACGGTA AAAACAAAGT GGTTTGTGTT
GATTGTCATA TGCCAAAAGT GACAAGAGAA GACGGTACGG TTTACACCGA TCATAAAGTG
GGCAACCCAT TCGATCGTTT TGAAGATACT TGTGCAAATT GTCACACGCA ATCAAAAGAC
ATGCTTCGTG AAATCGTTTC TAGTCGTAAA GCTCAAGTTT TAAAAATGAA ACTAACCGCT
GAACGCCAAA TTGTCGCGGC ACATTTTGAG GCAGGTGCAG CATGGGATGC AGGCGCAACT
AAAGAAGAAA TGGCACCTAT CCTACAAGAT ATTCGCCACG CACAATGGCG TTGGGATTAT
GCAATCGCTT CACATGGCAT ACACATGCAT GCACCTGAAG TAGCATTAGA AGTATTAGGT
TCGGCGGTTG ATCGTGCCGC AGATGCTCGA ACTAAATTGG TTCGACTGCT TGCGAAAAAA
GGCATTACTG ATCCAATCGA GATTCCTGAT ATTTCAACCA AAGCTGCTGC TCAAAAAGCA
CTAGGTATGG ATATGGAAGG CATGGAAGCG GAGAAAAAAC ACTTCTTAGA AACCGTTGTT
CCTAAATGGG ATCAACAAGC AAAAGAACGT GAAGCCGCAG ATTACCACCC CCTATAA
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| Protein sequence | MKKQWTRRSA AAIAMVTTLL LSSHSFAASE KTERVDPRNE AYAKQHADQY ESWRPTSDSV
QIEDALAEDP NMVILWAGYG FAKDYNKARG HFYAIDDVRE TLRTAGPTDE NSGPMPMACW
SCKSPDVGRV IEEQGEDGYF SGKWARLGSE IQNPIGCADC HDTRSEEFKN GGPALAITKP
HVERAMNAIG KPFDDQSRLD KQASVCGQCH VEYYFTGKTK AVKFPWDKGT TVDEMEEYYD
EIGFSDWTHK VSKAPMLKAQ HPGYETWREG IHGKNKVVCV DCHMPKVTRE DGTVYTDHKV
GNPFDRFEDT CANCHTQSKD MLREIVSSRK AQVLKMKLTA ERQIVAAHFE AGAAWDAGAT
KEEMAPILQD IRHAQWRWDY AIASHGIHMH APEVALEVLG SAVDRAADAR TKLVRLLAKK
GITDPIEIPD ISTKAAAQKA LGMDMEGMEA EKKHFLETVV PKWDQQAKER EAADYHPL
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