| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1985 |
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| Symbol | torR |
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| ID | 6989311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2126867 |
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| End bp | 2127565 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380282 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_002263373 |
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| Protein GI | 209695444 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.156357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTATC ACATTTTAGT TGTTGAAGAC GAAGTGGTAA CTCGCTCTAA GCTTGTAGGC
TATTTTGAAG CCGAGGGATA TCAAGTGAGC GAGGCTGAAA CGGGCGCAGA AATGCGAACT
GTTTTGGCTG AACAAAAAGT TGATTTAATT ATGCTTGATA TAAACCTACC AGGAGAGGAT
GGTTTATTAT TGGCGCGTGA ATTACGCAGC CAGTCTAATA TTGGTATTAT TTTAGTTACA
GGACGAACTG ATAGTATTGA CCGCATCGTA GGTTTAGAGA TGGGTGCGGA TGATTACGTA
ACAAAACCTG TGGAGTTACG TGAGCTTTTA GTCCGAGTTA AAAATCTATT TTGGCGTATG
TCATTAGCAA ATGAACCCGT AGAATTAGAT GAATCAAATT TAATTCGTTT TGGGGAATGG
ACGTTTGATA TTCAACGTCG TGCTTTATCG AACAATGGTG AGCCAGTTAA GTTAACGAAA
GCCGAATATG AGCTATTAGT TGCTTTGTCG TCTTATCCGA ACACGGTATT ATCACGTGAA
CGTATTTTAA ATATGATTAG CCACCGTGTT GATGCGCCAA ATGACAGAAT GATTGATGTT
TTGATCAGGC GAATGCGTGC CAAAATGGAA GTGGATCCAA AAAATCCTCA AATATTTGTT
ACTGTTCATG GCGAAGGGTA CATGTTTGCT GGTGATTGA
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| Protein sequence | MSYHILVVED EVVTRSKLVG YFEAEGYQVS EAETGAEMRT VLAEQKVDLI MLDINLPGED
GLLLARELRS QSNIGIILVT GRTDSIDRIV GLEMGADDYV TKPVELRELL VRVKNLFWRM
SLANEPVELD ESNLIRFGEW TFDIQRRALS NNGEPVKLTK AEYELLVALS SYPNTVLSRE
RILNMISHRV DAPNDRMIDV LIRRMRAKME VDPKNPQIFV TVHGEGYMFA GD
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