Gene VSAL_I1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1983 
SymbolpurR 
ID6989279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2124662 
End bp2125663 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content39% 
IMG OID643380280 
ProductHTH-type transcriptional repressor PurR (purine nucleotide synthesis repressor) 
Protein accessionYP_002263371 
Protein GI209695442 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.991617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCA TTAAAGACGT TGCGAAACTT GCTTCTGTTT CGACAACCAC CGTTTCTCAT 
GTAATTAACA AAACTCGATT TGTTGCAGAA GCAACTCAAA AAAGAGTATG GGAAGCCGTT
GAAGAACTAA ACTATGCACC GAGTGCCGTT GCTCGTAGTT TAAAGTGCAA CACAACTCGA
ACTATCGGCA TGCTAGTTAC CCAGTCCTTT AATCCATTTT TTGCCGAAAT GATGCACGGT
GTTGAGAACT ACTGTTACAA GCAAGGTTAC ACATTGTTTA TGTGTAATAC CGAAGGTGAT
CTAGACAAAC AAAAGCACTA CCTTCGTATG CTGGCAGAAA AACGTGTCGA TGGCTTATTA
GTTATGTGTT CTGATCTAAA TGAACAGTTA TTAGCACAAC TTGAAAAAAA CACAGAATTA
CCAATGGTAA TCATGGACTG GGGCCCAGAT AGTCCTCATA CCGACAAAAT TATTGATAAT
TCTGAAGAAG GTGGTTATTT AGCAACAAAA CACCTGATTG AAAATGGACA CACAAAAATT
GGCTGTGTTA CCGGTCAGCT TGATAAAGCA ACCTGTAAAG AACGAATTCA TGGTTTCTAC
AGAGCCTTAT CTGAAGCAAA TTTAACGTCA AATCCAGATT GGATATTTGA AGGTGATTTT
GAATGTTCTT CTGCCTCTAA ATCTGTTGAA AAAATGCTAC AGATGGAAGA TAAACCAACT
GCATTATTTT GTTTTAACGA CATTATGGCA TTAGCGGCTA TCAGCAAAAT TCAACAAACT
GGCTTACGCG TACCTGAAGA TATCTCAATC ATTGGTTACG ATAACATTGA ACTTTCTGCA
TATTTCTCTC CACCATTGAC GACGATTCAC CAACCTAAAC GTCGCGTTGG TAAGACCGCC
GTTGAAATAT TGTTGGAACG AATTAAAGAT AAGCACCATG AAAGACGCAT TTTTGAAATG
CATCCAGAAG TGGTTACTCG GAAAAGTGTC CATAAGTTGT AA
 
Protein sequence
MATIKDVAKL ASVSTTTVSH VINKTRFVAE ATQKRVWEAV EELNYAPSAV ARSLKCNTTR 
TIGMLVTQSF NPFFAEMMHG VENYCYKQGY TLFMCNTEGD LDKQKHYLRM LAEKRVDGLL
VMCSDLNEQL LAQLEKNTEL PMVIMDWGPD SPHTDKIIDN SEEGGYLATK HLIENGHTKI
GCVTGQLDKA TCKERIHGFY RALSEANLTS NPDWIFEGDF ECSSASKSVE KMLQMEDKPT
ALFCFNDIMA LAAISKIQQT GLRVPEDISI IGYDNIELSA YFSPPLTTIH QPKRRVGKTA
VEILLERIKD KHHERRIFEM HPEVVTRKSV HKL