Gene VSAL_I1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1982 
SymboltfoX 
ID6987493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp2123700 
End bp2124287 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content37% 
IMG OID643380279 
Productputative DNA transformation protein TfoX 
Protein accessionYP_002263370 
Protein GI209695441 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.42956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC CAATACTAAA AGATTCACTT CGATTACTTT CCTCTCTAGG AAAAATCACT 
TCACGCTCCA TGTTTGGCGG CTTTGGTGTT TTTATTGATG ACACAATGTT TGCACTTGTT 
GTTCAGGACA GACTGCATTT GCGAGCAAGC GATAACACTA TTAATTTATT TAAAGACCAA 
GGTTTTGAAC CTTACGTTTA TAAAAAACGT GGTTTCCCCG TGGTAACTAA ATATTTTGCT 
ATTTCACCTG AATGTTGGGA TGAACCTGAT TCAATCCTAA TTCAAGCTGT TGTTGCTTTA 
GATGTTGCTA AAAAAGACAA AGAAAAACAA AAAACAGCAG GTCCCTCTCG AATTAAGGAT 
TTACCCAATC TAAGATTAGC GACAGAGAGA ATGCTGAAAA AAGCAGGAAT AACGACCGTA 
AAAGAATTAA TGGACACGGG ATCTGTAAAC GCTTATAAAG CGATTCAACA GACTCATTCA 
AGTTCTGTTA GTGACGAACT ACTGTGGTCG CTTGAAGGAG CGATTAAAGG TACTCACTGG 
TCTGTTATCT CTACTGATAT TAGAAATGAA TTAAGAAAAC AACTTTAA
 
Protein sequence
MDKPILKDSL RLLSSLGKIT SRSMFGGFGV FIDDTMFALV VQDRLHLRAS DNTINLFKDQ 
GFEPYVYKKR GFPVVTKYFA ISPECWDEPD SILIQAVVAL DVAKKDKEKQ KTAGPSRIKD 
LPNLRLATER MLKKAGITTV KELMDTGSVN AYKAIQQTHS SSVSDELLWS LEGAIKGTHW 
SVISTDIRNE LRKQL