Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1974 |
Symbol | |
ID | 6987485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2115775 |
End bp | 2116482 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380271 |
Product | ABC transporter, ATP-binding component |
Protein accession | YP_002263362 |
Protein GI | 209695433 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA TTGACTCTTT AACGGTCTAT TACAATGATA ATCTCGCACT TGATTCTGTT TCTGTCGATA TTCAGCCACA AGATTTCATC GCTATTATTG GTCCAAACGG CGCAGGTAAA TCGACGTTAT TAAAATCGAT TATGCGCCAA ATAAAGCCAG TTTCTGGCTC TATTAGTCAC CCAAAAGAAC ACAAAAAAAT AATGGCTTAT CTACCGCAAT CACATCAAAT AGAACGTAAC TTCCCAATTT CAGTAGAAGA ATTTATTTCA GCGGGTGCTT GGTTACGAAC CAGTTTCTGG CGTCATTTTT CTCACAAAGA ACATACTCGC CTGCATGAGG TACTTAGGAC AGTAAAGCTA ATAGGAATGG AGAAACGACA AATAAGTGAA TTATCTGGAG GACAATTTCA GCGCATGTTA TTTGCAAGAA TGCTAATGCA AGATGCGTCA ATATTACTGC TTGATGAACC CTTTACCGCC ATTGATAGCC AAACCGTTTT TGACTTAATG CAGGTTCTTC GTGACTGCCA GAAACAAGGT AAAACCATCA TTGCAGTCGT TCATGATCTT TCTCTTGTTC AGCACTATTT TGATAAATCC ATATTAATGG CCACTGCATT AATTAAAGCA GGTACCACAA GTGATGTTCT TCAACCCACT TGGCTCTCTA AGGCGGGCTA TCAACATGGT TGTGGGGTAA TCGAATAA
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Protein sequence | MIKIDSLTVY YNDNLALDSV SVDIQPQDFI AIIGPNGAGK STLLKSIMRQ IKPVSGSISH PKEHKKIMAY LPQSHQIERN FPISVEEFIS AGAWLRTSFW RHFSHKEHTR LHEVLRTVKL IGMEKRQISE LSGGQFQRML FARMLMQDAS ILLLDEPFTA IDSQTVFDLM QVLRDCQKQG KTIIAVVHDL SLVQHYFDKS ILMATALIKA GTTSDVLQPT WLSKAGYQHG CGVIE
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