Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1962 |
Symbol | xthA |
ID | 6988629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2102307 |
End bp | 2103113 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380257 |
Product | exonuclease III |
Protein accession | YP_002263351 |
Protein GI | 209695422 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.134155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA TTAGCTTCAA TATAAATGGC CTTCGTGCTC GTCTTCATCA ATTACAAGCT ATCATTGATA AACACAACCC TGATGTTATT GGTCTTCAAG AGATCAAAGT ACATAACGAC ATGTTTCCAG TCGAAGCCGT TGAAGCCATG GGTTATAACG TGTATTTCCA CGGCCAAAAA GCGCACTACG GCGTGGCAAT GCTTTGTAAA AAAGAACCAA TTTCTGTTCA ATATGGGTTT GATACCGATA CTGAAGAGCA TCAAAAACGC ATGATCATGA CAACACATGA ACGCGATGAT GGCTCAAAAG TAACCGTGAT GAATGGCTAT TTCCCACAAG GTGATAGCAT TAAGCACGAA ACTAAATTTC CATATAAACG TCAATTTTAT AAAGATTTAA TGATTCATCT GAATACTCAT CATACTAATG ATGAAGAATT GATCATTATG GGTGATATTA ATATTAGCCC AATAGATGCA GATATCGGTA TTGGCGAGCC CAACGCAAAA CGTTGGTTGA GAACTGGGAA ATGTTCTTTC CAACCTGAAG AGCGTGAATG GCTACAAGCG CTAAAAGATT GGGGATTTGA AGATACTTTC CGCAATCTTC ATCCTGAAGT AACCGATCAA TTCTCTTGGT TTGATTATCG TTCAAAAGGC TTTGTTGATA ATCGTGGCCT TCGTATTGAT GTTGTAATGG CTACCCCCTC ATTAGCAGGT AAGTGTACTG AAGCGGGTAT TGACTACGAA TTACGTGCAA TTGAAAAACC GTCTGACCAC GCACCAATCT GGTCTACTTT TAAATAG
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Protein sequence | MKVISFNING LRARLHQLQA IIDKHNPDVI GLQEIKVHND MFPVEAVEAM GYNVYFHGQK AHYGVAMLCK KEPISVQYGF DTDTEEHQKR MIMTTHERDD GSKVTVMNGY FPQGDSIKHE TKFPYKRQFY KDLMIHLNTH HTNDEELIIM GDINISPIDA DIGIGEPNAK RWLRTGKCSF QPEEREWLQA LKDWGFEDTF RNLHPEVTDQ FSWFDYRSKG FVDNRGLRID VVMATPSLAG KCTEAGIDYE LRAIEKPSDH APIWSTFK
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