Gene VSAL_I1961 details

Gene Information

• Locus tag: VSAL_I1961
• Symbol: grxB
• ID: 6988238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2101503
• End bp: 2102153
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643380256
• Product: glutaredoxin 2
• Protein accession: YP_002263350
• Protein GI: 209695421
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2999] Glutaredoxin 2
• TIGRFAM ID: [TIGR02182] Glutaredoxin, GrxB family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0519203
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAT TCATCTTTGA TCACTGTCCG TTTTGCATGA AAGCAAAAAT GGTCGCAGGA 
ATAAAAAATC TTCCTGTTGA ATTTACTTAC CTTCAAAATG ATGATGTCGA TACGCGTATC 
GAAATGGTGG GGGCAAATAT GGTACCTATT TTAGAGAAAG ACGACGGCAC CTACATGGCT 
GAAAGCCTTG ATATTGCAAA ATACCTCGAC GAAAACGACC ATTATCCGGT CATTGAACAA 
GGTACTTGTG CTGATGATAT TTCAGAATGG TTAAGTAACG TTCGTCCTTT ATTTAATAAA 
TTGACCTTTC CTCGTTGGAC TAAATTTGAT TTACCAGAGT TCGAACGTCC TGAAGCCGTT 
ACTTGGTTTA CGGACAAAAA AGAAGCATTT ATTGGGATGA GTTTTGACGA CGCTTTTGCC 
CAAAGCGATA AGTTTATTAA TGAATTAACA CCTTTATTGG TTGATGTTAA CTTCATCACT 
TTACCTTCAG AGAAAGGAAA TAAGATCACT TGGGATGACA TCAATTTTTT CCCATTCCTG 
CGTAATCTGA CGGTAGTAAA AGGATTGGAC TTCCCTCCTC ATCTAAAAAA CTATTTAGAA 
GAGATCAGTG AGCTTACCGG TGTGAATCTA TACTTAGATA TTGCGGTATA G 

 

Protein sequence

MKLFIFDHCP FCMKAKMVAG IKNLPVEFTY LQNDDVDTRI EMVGANMVPI LEKDDGTYMA 
ESLDIAKYLD ENDHYPVIEQ GTCADDISEW LSNVRPLFNK LTFPRWTKFD LPEFERPEAV 
TWFTDKKEAF IGMSFDDAFA QSDKFINELT PLLVDVNFIT LPSEKGNKIT WDDINFFPFL 
RNLTVVKGLD FPPHLKNYLE EISELTGVNL YLDIAV