Gene VSAL_I1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1957 
SymbolaotP 
ID6987475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2098078 
End bp2098848 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content41% 
IMG OID643380252 
Productarginine/ornithine periplasmic binding protein-dependent transporter, ATP-binding component 
Protein accessionYP_002263346 
Protein GI209695417 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATG TTGTCGCGCT AGAAGTGAAA GATTTACATA AACACTTTGG GAAAAATGAA 
GTATTAAAAG GGATATCACT GGAAGCCAAC AAAGGTGACG TAATCTCTAT TATTGGTTCA
TCTGGCTCAG GTAAAAGTAC CTTCCTACGT TGTATTAATT TATTAGAAAC ACCGACCAAA
GGCGAAATTT GGGTTAATGG TGAATTGATT GAGATGAAGA ATAACCGCCT TGGTGAATCC
ATCCCAGTTA ACGAAAAACA AGTCCAACGA ATTCGCTCAC GCCTCGCTAT GGTATTTCAA
GGATTTAACC TTTGGTCTCA TATGACGGTT TTACAAAATG TAATAGAGGC ACCAATACAT
GTTCTTGGTG TACCAAAAGC AGAAGCGATT GAGAAAGCAG AACAAATTTT AAAGCAAGTT
GGGTTATATG AGCGTCGCGA TTATTACCCA GGACATCTAT CTGGTGGCCA ACAACAACGT
GCAGCCATTG CCCGAGCACT CGCCGTTGAT CCTGAAGTCA TGTTATTTGA TGAACCAACC
TCAGCCTTAG ATCCTGAATT GGTTGGTGAG GTTTTAGGCG TAATGCGTGA CTTGGCAGAA
GAAGGACGAA CCATGTTAGT TGTCACCCAT GAAATGGCTT TTGCTCGTGA TGTATCAAAT
CATGTCATGT TTTTACATCA AGGTTTGGTC GAAGAGCAGG GGGATCCAAA GAAACTCTTT
ACTGAACCAG AATCCGAACG ATTACAGCAA TTTATTTCGT CAATATACTG A
 
Protein sequence
MKDVVALEVK DLHKHFGKNE VLKGISLEAN KGDVISIIGS SGSGKSTFLR CINLLETPTK 
GEIWVNGELI EMKNNRLGES IPVNEKQVQR IRSRLAMVFQ GFNLWSHMTV LQNVIEAPIH
VLGVPKAEAI EKAEQILKQV GLYERRDYYP GHLSGGQQQR AAIARALAVD PEVMLFDEPT
SALDPELVGE VLGVMRDLAE EGRTMLVVTH EMAFARDVSN HVMFLHQGLV EEQGDPKKLF
TEPESERLQQ FISSIY