| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1952 |
|---|
| Symbol | |
|---|
| ID | 6987472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2090451 |
|---|
| End bp | 2091623 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643380247 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002263341 |
|---|
| Protein GI | 209695412 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAT TAAGCTTTTC ACTACAAGAA TTTCTCTCGG AATATTGGCA GAAAAAACCC
GTCATCATCA AAGGTGGTTT TGAGAACTTT CAAGATCCAG TCACACCTGA AGAATTAGCA
GGTTTAACAC TAGAAAACGA AGTGGACTCA GGCTTTGTTT CTAACTTAAA TGGCGAATGG
AAAGCAGAAC ACGGCCCATT AACTGAAGAA CTATTTGATA CACTGGGCGA AACTAACTGG
TCTATTATCG TTCAAGCCGC TAACCATTGG CATGAAGGTG CAGCTGAGTT GTTTAAACCA
TTTAAACAAA TGCCAAATTG GTTATTTGAT GATGTAATGA TCAGCTATTC AGTACCCGAT
GGTGGCGTAG GCCCGCACAT TGATCAATAT GATGTTTTTA TTATTCAAGG CCAAGGTAAG
CGTCATTGGC GTGTGGGTGA TATCGGCGAA TACGAAGAAG AACATCGTCA TGGTACATTA
AAGCAAATTA CAGGTTTTGA TCCGATCATT GATCAAATCT TAGAACCGGG TGATATTCTT
TATATTCCAC CAGGCTTTCC ACACGATGGC TACGCACTAG AGCCATCAAT GAGTTACTCT
GCCGGCTTCC GCTCTCCAAA AGAACAAGAG CTAGTGAGTA ATTTTGCGGA TTTCATTATT
GAAAATGAAA AAAATGATGT GCATTACCAT AATCCAGATC TTAAAGCGCA AACACATGGC
ACAGAGATCA CCACACAAAG TTTTGAAGAT TTAAAAGCCA TGATGCTAAA TGCGTTGTCG
GATGAACAGA GCCTTAAGCA ATTTATGGGA GAGTATTTAA GTAACTCTCG CCATCATTTG
AACATTTTGC CTGATACTGA GAAGTGGACA ACAGAAGAGT TATTGGCTTA TCTACAATCA
GGTCAAGCTC TGATTAAAGT GGCCGGTGTT CGTGCTTTCT ATCATGAAGA AGAAGCATGT
GAAGACAACA TGACACTTTA TATTGATGGT GAGAGCTATG TGTTCCCACT AACAGTAAAA
GAGGATGTGA TTGCTTTATG TGAATCATCA GAATTTACAC TACTTGATAT TGAGAACTTA
CTGCAAGATC CGCACTCAGT GGCTAACCTG CTGCAATTTG TCAACACAGG TTACTGGTTC
GTAGAATCAG ACGAAGACGA AGACGAAGAA TAA
|
|---|
| Protein sequence | MYQLSFSLQE FLSEYWQKKP VIIKGGFENF QDPVTPEELA GLTLENEVDS GFVSNLNGEW
KAEHGPLTEE LFDTLGETNW SIIVQAANHW HEGAAELFKP FKQMPNWLFD DVMISYSVPD
GGVGPHIDQY DVFIIQGQGK RHWRVGDIGE YEEEHRHGTL KQITGFDPII DQILEPGDIL
YIPPGFPHDG YALEPSMSYS AGFRSPKEQE LVSNFADFII ENEKNDVHYH NPDLKAQTHG
TEITTQSFED LKAMMLNALS DEQSLKQFMG EYLSNSRHHL NILPDTEKWT TEELLAYLQS
GQALIKVAGV RAFYHEEEAC EDNMTLYIDG ESYVFPLTVK EDVIALCESS EFTLLDIENL
LQDPHSVANL LQFVNTGYWF VESDEDEDEE
|
|---|
| |