| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1946 |
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| Symbol | oppA |
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| ID | 6987471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2082386 |
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| End bp | 2084050 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380242 |
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| Product | oligopeptide transport system permease protein B |
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| Protein accession | YP_002263336 |
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| Protein GI | 209695407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAA ATAAAATTAC ACAAGCAATT TTGCTTGGTG GCTTGTCACT AACACTTGTT
GGCTGTGGAG ATAAAACCGC AGAGCAACCA GTAAAAGAAA CAAAACCTGC TGAAAAAGCA
GTATCAACTG ACTCTGTTTA TGCCGACGTT CAAGAACTGA CTCGTGGTAA TGGAACAGAA
GTAGCCACTC TTGACCCCCA CAAATCTCAA GGTGTCCCTG AGTCTCACGT TATTCGTGAT
TTACTTGAAG GTCTTGTTAA TCAAGATGCG GCAGGTAATA CCATTCCTGG CGTTGCTGAG
AGTTGGGAAA CGACCGATAA TAAAAAATTC ACTTTCCATT TACGTAAAGA CGCTAAGTGG
TCAAATGGTG ATCCTGTCAC TGCGGATGAT TTTGTATACA GCTTCCAACG TGCAGTGGAT
CCAGCAACCG CTTCTCCATA CTCTTGGTAT ATGGAATATA CTAAGATGGC GAACGCAAAA
GACATCGTTG CAGGTAAAAA AGACAAAAGT GAGCTAGGTG TTAAAGCGAT TGATGCAAAT
ACATTAGAAG TTCAACTTGA TACTGCCGTT CCTTATTTTG TGATGATGAT GGGTCATACA
ACAATGATGC CTGTTCATAA AGCCACAATC GAAGAATTTG GTGATCAGTG GACTAAGCCG
GGTAATTTCG TTGGTAACGG TGCATTTGTT GTAAATAAAT GGGTTGTGAA CGAACGTTTA
GAATTAACTC GTAACGAGCA ATATTGGGAT AATGCCGATA CAAAATTAAC GAAAGTGACG
TTCTTACCGA TTGAAAACCA AGTGTCGGAA ATGAACCGTT TTCTTTCTGG TGAACTCGAC
TTTACTAATG AATTACCAGT TGAACACTTT AAGCGCTTGA AAAAAGAAGA ACCAGAATCA
GTGTCGGTAG TGGGTAGTCT ATGTACTTAC TATTATTCAT TTAATACGAA GAAAGCACCC
TTTGATGATG TTCGAGTTCG TAAAGCGATT TCTTACGCAA TTGACCGCCC AATTATATCT
GACATTATTT TAGGTCAAGG CCAAAAACCT GCGTATTTCT TAACACCAGA GATCACGGCT
GGCTTTAATC CTGAGCTACC AGCTTACGGT AAAATGACTC AAGATGAGCG TAATGCTGAA
GCGAAACGCT TACTTGTTGA AGCCGGATTT GGTCCTGAAA ACCCACTGAA ATTTACCCTT
TTATACAACA CGTCTGAAAA CCATAAGAAA ATTGCGGTTG CAGCGGGTTC TATGTGGAAA
AAAACACTAG GACTAGAAGT GGTACTAGAA AATCAAGAAT GGAAAACGTA CCTAGATTCA
AAAGACCAAG GTCAATTTGA AGTAGCGCGT GCTGGATGGT GTGGCGATTA TAATGAAGCG
TCTGCTTTCT TGACATTAAT GGTGAGTAAA AACACCACGG GTGGTCAACA TTACGGAAGT
GCTGAATATG ATGCATTGAT TGAAAAAGCA TTAGCATCAA CATCAGAAGA AGAACGTACA
GCTATCTACC TACAAGCTGA ACAGCTATTG GCGAAAGATA TGCCAATTGC TCCTATCTAT
CAGTATGTAA AATCTCGTCT ATTATCTCCA CAAGTAGGTG GCTTCCCTGT TGAAAATGCG
GAAGAAAAAA TCTACTCGAA AGACCTATAC ATAAAAGCTA AATAA
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| Protein sequence | MYKNKITQAI LLGGLSLTLV GCGDKTAEQP VKETKPAEKA VSTDSVYADV QELTRGNGTE
VATLDPHKSQ GVPESHVIRD LLEGLVNQDA AGNTIPGVAE SWETTDNKKF TFHLRKDAKW
SNGDPVTADD FVYSFQRAVD PATASPYSWY MEYTKMANAK DIVAGKKDKS ELGVKAIDAN
TLEVQLDTAV PYFVMMMGHT TMMPVHKATI EEFGDQWTKP GNFVGNGAFV VNKWVVNERL
ELTRNEQYWD NADTKLTKVT FLPIENQVSE MNRFLSGELD FTNELPVEHF KRLKKEEPES
VSVVGSLCTY YYSFNTKKAP FDDVRVRKAI SYAIDRPIIS DIILGQGQKP AYFLTPEITA
GFNPELPAYG KMTQDERNAE AKRLLVEAGF GPENPLKFTL LYNTSENHKK IAVAAGSMWK
KTLGLEVVLE NQEWKTYLDS KDQGQFEVAR AGWCGDYNEA SAFLTLMVSK NTTGGQHYGS
AEYDALIEKA LASTSEEERT AIYLQAEQLL AKDMPIAPIY QYVKSRLLSP QVGGFPVENA
EEKIYSKDLY IKAK
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