Gene VSAL_I1907 details

Gene Information

• Locus tag: VSAL_I1907
• ID: 6987444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2040537
• End bp: 2041199
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643380208
• Product: putative ion channel
• Protein accession: YP_002263303
• Protein GI: 209695374

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG TGTCAAGGGA TGATAATTTC TACTTCTTAT TTTTTGCTTT ATTAGGCCTT 
CTGTTTACTA GTTCGGTAAT GCAACAACTA TTTGAAGGAG GCCAGAAAAT GATCTTGGCG 
TTGATCATTA TTTGTTTGGC GGTTTCTATT GTGGGTGTAA ATCATAAACA AACCTTTTAT 
CGAAGTTGGT ATGGCTTTTT ATTAAGTCTT GCCGCAATCT CGGGAATATT TTCATTTTTT 
GAAGGTTATG ATTGGTCCTT AATTACATTA ACAGCGTTAT TGTTTTTTTT ACTGTCTCAT 
ACTTATGCCG CGCTAAAGCA AGTCATGTTA ACAGATTATG TTAGCCGCAA TCAGATCGTA 
GGGTCTGTTT GCGTTTATTT ATTGCTTGGG ATGTCATGGG CAATTATCTA TCTTATTCAA 
ATAGAACTTT TTCCACAGGC ATTTTATGGT ATTGAAGATA AGGCTTGGAT AGATAATTTA 
TTTGAAGTGA TTTATTTTAG TTTCATTACA TTAACAACGG TAGGGTATGG CGATATTTCA 
CCTGTTTTAC CCATACCTAA ATTCTTTGTT TTTTTAGAGT CACTTATTGG TAGTTTTTAT 
TTAGCGATAA TGGTGGCAAG TTTAGTGAGT AGTCGTTTAA ATCAGTCAGA CAACCAACGT 
TAA 

 

Protein sequence

MKKVSRDDNF YFLFFALLGL LFTSSVMQQL FEGGQKMILA LIIICLAVSI VGVNHKQTFY 
RSWYGFLLSL AAISGIFSFF EGYDWSLITL TALLFFLLSH TYAALKQVML TDYVSRNQIV 
GSVCVYLLLG MSWAIIYLIQ IELFPQAFYG IEDKAWIDNL FEVIYFSFIT LTTVGYGDIS 
PVLPIPKFFV FLESLIGSFY LAIMVASLVS SRLNQSDNQR