| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1891 |
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| Symbol | cydB |
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| ID | 6988367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2027179 |
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| End bp | 2028315 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380192 |
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| Product | cytochrome d ubiquinol oxidase subunit II |
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| Protein accession | YP_002263287 |
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| Protein GI | 209695358 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATT ACGAAGTATT GCGATTTGTT TGGTGGGTAT TGATTGGTGT ATTACTGATT
GGTTTCGCGG TAACAGATGG TTTTGATATG GGGGTAGGTA CACTAGTGCC TATCATCGGT
AAAACAGATA CAGAACGTCG AGTGATGATT AACTCAATCG CCCCTCACTG GGAAGGCAAC
CAAGTTTGGT TAGTAACAGC AGGCGGTGCA TTATTTGCTG CTTGGCCTTT AGTGTATGCT
GCTTCATTCT CTGGCTTTTA CTTAGCTATG ATTCTGACAT TAGCTGCATT ATGGTTCCGC
CCTGTTGGGT TTGATTATCG TTCTAAAATT GAAGATAAAC GCTGGCGTTC AGCGTGGGAT
GCTGCGATCT TCATTGGTAG CTTTGTTCCA CCAGTCATCT TTGGTGTTGC TTTTGGTAAC
TTACTTCAAG GTGTTCCATT TGAACTGAAC AACCTAATGA TGCTTAAGTA TCATGGTGGT
TTCTTTGACT TATTAAATCC ATTTGCATTG GTATGTGGTC TAGTGAGCTC TGCAATGTTT
GTACTGCAAG GTTCAACATG GCTACAAATG AAAACAACGG ATCAAATTCA CGCTAGAGCA
AGTCAAGTTT CTATGATTTG TGCTGCGTTA GTAATTGTTC TGTTTACTAT TGCTGGCTTT
TGGGCTCAAA GCATTAATGG GTTTGTGATC ACGAGTGTTA TGGATCATAA CGCACCATCA
GATCCATTAA ATAAAGAAGT TATCCGTCAA GTGGGCGCTT TATTCTTGAA CTTCAAAGAA
TACCCATTGT TATGGATAGC ACCTGCTCTT GCGGTAGTTA TGCCTCTTAT TGTTATGATT
ACAACTAAGT TGAAGAGACC TGGAATTGCT TTCATCGCAT CAAGTCTGAC TAATGCTGGT
GTGATCTTAA CTTCTGGTTT TGCATTATTC CCATTCGTAA TGCCATCAAG TTTAAATCCT
AACCATAGTT TGACTATGTG GGATTCAACA TCAAGCGAAT TAACACTAAA CATTATGACA
GTGGTAGCTG CTGTTATGAT CCCAATCATC CTTGCTTACA CAGCATGGAC GTATTATAAA
ATGTTTGGTC GTATTGATAC TAAATTTGTT GAAGACAACA AAAATTCGCT TTATTAA
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| Protein sequence | MFDYEVLRFV WWVLIGVLLI GFAVTDGFDM GVGTLVPIIG KTDTERRVMI NSIAPHWEGN
QVWLVTAGGA LFAAWPLVYA ASFSGFYLAM ILTLAALWFR PVGFDYRSKI EDKRWRSAWD
AAIFIGSFVP PVIFGVAFGN LLQGVPFELN NLMMLKYHGG FFDLLNPFAL VCGLVSSAMF
VLQGSTWLQM KTTDQIHARA SQVSMICAAL VIVLFTIAGF WAQSINGFVI TSVMDHNAPS
DPLNKEVIRQ VGALFLNFKE YPLLWIAPAL AVVMPLIVMI TTKLKRPGIA FIASSLTNAG
VILTSGFALF PFVMPSSLNP NHSLTMWDST SSELTLNIMT VVAAVMIPII LAYTAWTYYK
MFGRIDTKFV EDNKNSLY
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