| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1871 |
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| Symbol | rnfB |
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| ID | 6989133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2005812 |
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| End bp | 2006396 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380170 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_002263267 |
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| Protein GI | 209695338 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00186515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTCTA TTTTAATTGC CGTTATTGCA ATCTCTGCCC TAGCCCTCGT TTTCGGGTTA
ATTCTCGGTT TTGCATCAAT AAAATTCAAA GTTGAATCCG ATCCAATCGT CGATCAAATT
GACTCTATAT TGCCACAAAC TCAATGTGGT CAATGTGGTT ATCCAGGTTG CAAGCCTTAT
GCAGAAGCCA TTGCAAACGG TGACACCATT AATAAATGTC CTCCAGGTGG TCAAGCTACG
ATTGAAAAGT TAGCCGATCT AATGGGCGTG GATATCCCAA GCTCTGCTCA TGATGAAGAA
AAAAGTATTA AAAAAATCGC CTTTATTCAT GAGGACATGT GTATTGGATG TACTAAATGC
ATTCAAGCCT GCCCTGTGGA CGCGATTGTT GGCGGCACAA AAGCACTACA TACTGTTATT
GAAGCAGAAT GTACTGGCTG TGATTTATGT GTTGCGCCAT GCCCAACAGA TTGCATTGAA
ATGATCCCTG TAAATACAAC GCCTGATAAT TGGAAATGGG ATTTAAATAC AATCCCTGTT
GTGAATCTTC CTGCAGATAA ACCAACTAAA GCATCGGAGC TGTAA
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| Protein sequence | MSSILIAVIA ISALALVFGL ILGFASIKFK VESDPIVDQI DSILPQTQCG QCGYPGCKPY
AEAIANGDTI NKCPPGGQAT IEKLADLMGV DIPSSAHDEE KSIKKIAFIH EDMCIGCTKC
IQACPVDAIV GGTKALHTVI EAECTGCDLC VAPCPTDCIE MIPVNTTPDN WKWDLNTIPV
VNLPADKPTK ASEL
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