Gene VSAL_I1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1866 
Symbolnth 
ID6988599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp2000625 
End bp2001260 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content40% 
IMG OID643380165 
Productendonuclease III 
Protein accessionYP_002263262 
Protein GI209695333 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.561613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATG TCAAACGACT CGAAATTTTA ACGCGTTTAC GTGCAGAGAA CCCAAAGCCA 
GAGACTGAAC TCGAATGGTC CAGCCCATTT GAGTTACTCA TTGCCGTATT ATTATCCGCT 
CAAGCGACAG ATGTTAGCGT TAACAAAGCC ACGCGTAAAC TCTACCCAAT AGCAAACACC 
CCTCAAGCTA TTTTAGATTT AGGGGTTGAT GGACTTAAAA CCTACATAAA AACCATTGGA 
TTATTTAATA CCAAAGCAGA AAACGTCATT AAAACATGTC GTATGCTTAT TGAATTACAT 
GACAGTGTCA TTCCTGAAGA TCAAGACGCA TTAGAGGCCC TCCCTGGAGT TGGCCACAAA 
ACAGCAAATG TCGTTCTAAA TACCGCTTTT GGTTGGCCAA CCATTGCCGT TGATACTCAT 
ATTTATCGTG TATCGAATCG AACAAAATTG GCAATGGGTA AAACAGTTAA CGACGTTGAA 
AAAAAATTAC TCAAAGTCGT ACCAAAAGAA TTTAAGTTGG ATGTTCATCA CTGGTTAATT 
CTACATGGAC GCTATACCTG TATCGCTCGA AAACCTCGTT GCGGCAGTTG CCTTATTGAA 
GATTTATGTG AGTTTTCTGA AAAAACAGAA AGCTAG
 
Protein sequence
MNNVKRLEIL TRLRAENPKP ETELEWSSPF ELLIAVLLSA QATDVSVNKA TRKLYPIANT 
PQAILDLGVD GLKTYIKTIG LFNTKAENVI KTCRMLIELH DSVIPEDQDA LEALPGVGHK 
TANVVLNTAF GWPTIAVDTH IYRVSNRTKL AMGKTVNDVE KKLLKVVPKE FKLDVHHWLI 
LHGRYTCIAR KPRCGSCLIE DLCEFSEKTE S