Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1854 |
Symbol | |
ID | 6987423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1987870 |
End bp | 1988718 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643380153 |
Product | putative ion transport protein |
Protein accession | YP_002263250 |
Protein GI | 209695321 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.807615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA AGAATATTAA ACATTATCTC TACATTACTA TTTTTGGAAC TCATACAAAG GGGGGACGAG CTTTTGACAT TGGATTGATA TGTTTAATTC TAGCTTCTCA GGCAACCTTA ATTTTAGACT CAATGGCATC AGTTAAAGCT GAGTATGGTG AACTATTATG GACATTGGAA TATATCTTCA CTGCATTTTT CACGCTTGAA TATTTTTTAC GTCTTTATTG CTCACCAAAA CCGGCTTCTT ACGCTAAAAG CTTTTATGGC ATTATTGATG TATTAGCTAT TTTACCTACT TACCTAGCTC TCTTTTTCCC AAGTGCGAGT TATATTGCCA TTATTCGTCT TTTACGTGTA ATGAGAATAT TTAGAGTCTT AAAACTGGTT CGATACTTAC AAGACTCAAA CATACTTTTA CGTTCATTGT TAATGGCAAA AAGAAAAATT CTGATCTTCT TTAGCACCGT TGCTATTTTA GTCTCTGTTT TTGGTTCATT AATGTTTGTT ATTGAAGGAC CAAATAATGG GTTTACGAGT ATTCCCCAAA GTATTTATTG GGCTATCGTG ACCATTACCA CAGTAGGCTA TGGTGATTTA GTTCCACACA CTGCGTTAGG TAAAGCGGTG GCTTCATTAA CGATGTTATT AGGTTATTCA ATATTAGCGG TACCAACAGG AATAATTACA GCAGAATTAA ATCAAGAGAT GAATGCACAT CGAGATCTTG TGCGTTGTCC AAATTGCGTT AAAGGTGGGC ATGAATCAGA TGCGATGCAC TGTAAGCATT GTGGAAGTAA ACTACCTGAG CCTCAGGAAA GAATAGTAAG ACCAAATCAA AATAGATAG
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Protein sequence | MNNKNIKHYL YITIFGTHTK GGRAFDIGLI CLILASQATL ILDSMASVKA EYGELLWTLE YIFTAFFTLE YFLRLYCSPK PASYAKSFYG IIDVLAILPT YLALFFPSAS YIAIIRLLRV MRIFRVLKLV RYLQDSNILL RSLLMAKRKI LIFFSTVAIL VSVFGSLMFV IEGPNNGFTS IPQSIYWAIV TITTVGYGDL VPHTALGKAV ASLTMLLGYS ILAVPTGIIT AELNQEMNAH RDLVRCPNCV KGGHESDAMH CKHCGSKLPE PQERIVRPNQ NR
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