Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1850 |
Symbol | |
ID | 6988583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1985842 |
End bp | 1986246 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380149 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_002263246 |
Protein GI | 209695317 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.510559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAT CAAAATCATT TTCTGACTTT ACAAACGAAG ATTGGAAAAG TGAGTTAACC GACGAAGAAT TTGTGGTTTG TCGACAAAAA GGCACAGAAG CGCCTTTTTC AGGAAAGCTT TTACAGAATA AGGCGACAGG GAATTATGCG TGTACCTGTT GTCATGTGGA TTTGTTTTCA TCAGAGAATA AATACGATTC TGGTTGTGGA TGGCCAAGCT TTGATGAACC ATTAAATACG CAGGTTATTC GATATATAAA AGACAATAGC CATGGCATGG CGCGAGTAGA GATTCGATGT GCCCGCTGTG ATAGTCATTT AGGGCATGTA TTTAATGATG GTCCTAAAAC GACCGGAGAG CGTTTTTGTG TTAACTCTAT TTCTCTACGC TTTAAAGGTA AATAA
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Protein sequence | MNQSKSFSDF TNEDWKSELT DEEFVVCRQK GTEAPFSGKL LQNKATGNYA CTCCHVDLFS SENKYDSGCG WPSFDEPLNT QVIRYIKDNS HGMARVEIRC ARCDSHLGHV FNDGPKTTGE RFCVNSISLR FKGK
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