Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1847 |
Symbol | gsk |
ID | 6987418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1982083 |
End bp | 1983387 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380146 |
Product | inosine-guanosine kinase |
Protein accession | YP_002263243 |
Protein GI | 209695314 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.324608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTTTC CAGGTCAACG TAAATCCAAG CATTATTTTC CTGTTCACGC TCGTGATCCA TTAGTGAGTC AAGCTCAAGA AACCAAAAAA ATGTCGCGTA CGCACATTAT TGGTATTGAT CAAACCTTAG TGGATATTGA AGCTAGAATT GATGATGCTT TTATTGAAAA GTATGGCTTG AGTAAAGGAC ACTCACTGGT TATCGATAAT GATAAAGCGG AAATGCTTTA TAATGAGCTT AAAGATAACA ATATGATCAC CAACGAATAC GCTGGTGGCA CGATTGGTAA TACACTTCAT AACTATTCAG TGCTTGCTGA TGATAAATCA ACACTGCTTG GTGTTATGAG TGAAGATATC CATATTGGTA GTTATTCTTA TCGTTACCTT TGTAATACTT CAAGCCGTAT GGATTTGAAT TATCTGCAGC CTGTACCTGG TGCAATAGGC CGTTGTTTTG CTTTAATTAG CCAAGATGGC GAGCGTACGT TTGCAATCAG TGAAGGGGAC ATGAATCAAC TTCGTGCTGA TAGTATTCCT GAAAAGATTT TTAAAAATGC GTCTGCATTA GTATTAACGG CTTATCTTGT TCGTTGTAAA GAGGGTGACC CAATGCCTGA AGCAACCATG AAAGCCATTG AGTTCGCGAA GAAATATGAT GTGCCTGTTG TCCTAACTAT GGGGACCAAA TTTGTTGTTC AAGATGACCC TCAATATTGG CGTGACTTCC TAAGTGATCA TGTGTCTGTT GTGGCAATGA ATGAAGAAGA AGGTGAAGCA TTAACGGGTG CTTCTGACCC ATTAGAAGCG GCAGATAAAG CGCTTGAGTG GGTTGATCTT GTTTTATGTA CTGCTGGCCC TGTTGGACTG TACATGGCAG GTTACACAGA AGAATCAGCG AAACGTGAAA CATCGTTGCC ATTACTTCCA GGAACAATCG CTGAATTTAA TCAATATGAA TTCAGTCGTC CAGCAGTTAA AGCAAGTTGT GATCAGCCGA CAAAAGTATA TTCTCATATT TCACCGTACA TGGGTGGCCC TGAGAAAATC AAAAATACGA ATGGCGCGGG TGATGGTGCT TTGTCTGCAT TATTACATGA TATGGCTGCA AATCATTACC ATCGTAATAA TGTACCGAAC TCAAGTAAGC ATCAGCATTC TTACTTAACG TACTCTTCAT TATCTCAAGT ATGTAAATAC TCAAACCGAG TAAGCTTTGA GGTTTTGGCT CAGCATTCAC CACGCTTATC TCGTGGGTTA CCTGAACGCG AAGACAGTTT AGAAGAGTCA TACTGGGAAA GATAA
|
Protein sequence | MKFPGQRKSK HYFPVHARDP LVSQAQETKK MSRTHIIGID QTLVDIEARI DDAFIEKYGL SKGHSLVIDN DKAEMLYNEL KDNNMITNEY AGGTIGNTLH NYSVLADDKS TLLGVMSEDI HIGSYSYRYL CNTSSRMDLN YLQPVPGAIG RCFALISQDG ERTFAISEGD MNQLRADSIP EKIFKNASAL VLTAYLVRCK EGDPMPEATM KAIEFAKKYD VPVVLTMGTK FVVQDDPQYW RDFLSDHVSV VAMNEEEGEA LTGASDPLEA ADKALEWVDL VLCTAGPVGL YMAGYTEESA KRETSLPLLP GTIAEFNQYE FSRPAVKASC DQPTKVYSHI SPYMGGPEKI KNTNGAGDGA LSALLHDMAA NHYHRNNVPN SSKHQHSYLT YSSLSQVCKY SNRVSFEVLA QHSPRLSRGL PEREDSLEES YWER
|
| |