| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1844 |
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| Symbol | serS |
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| ID | 6987417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1979589 |
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| End bp | 1980896 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380143 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_002263240 |
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| Protein GI | 209695311 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0308873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGATT CAAAATTACT TCGTACAGAG CTGGATGAAA CAGCAGAGAA ACTGGCACGT
CGTGGCTTTA AGCTAGACGT AGAGACACTT CGCACCCTTG AAGAACAACG TAAATCTCTT
CAAGTTATCA CGGAAGATCT TCAAGCGCAG CGTAATTCCC GTTCGAAGTC CATTGGTCAA
GCAAAAGCGA AGGGCGATCA TGAAGAAGCA GATCGCATCA TGGCTGATGT TGCAACATTA
GGTTCAGAAC TAGATGATGC AAAAGCAGGA CTTGCTGAGC TTCAACAACA AATTGAAAGC
ATCGCTTTGT CAGTACCAAA CCTTCCTGAT GAGTCAGTAC CATATGGTAA AGATGAAGAT
GAAAACGTAG AAGTATTACG TTGGGGTACA CCGCTAACGT ACGATTTTGA AGTGAGAGAT
CACGTTGCTC TTGGTGAGCT TGCGGATGGT CTTGATTTCG CAAGTGCAGT TAAAATCTCA
GGCTCTCGTT TCATCGTTAT GAAAGGTCAG TTTGCGCGTT TACACCGTGC TTTATCGCAA
TTTATGCTTG ATCTTCATAC TGAAGAGCAC GGTTACATGG AAATGTATGT ACCTTACTTA
GTTAACCACG ACAGCCTATA TGGTACTGGT CAACTGCCTA AGTTTGGTGA AGACTTATTC
CATACAAGTC CGCTAACAGA GCAAGTAAGT GATGTTCCTC TTAAGATGCT ATCTCTTATC
CCTACAGCGG AAGTGCCAGT AACAAACATG GTACGTGACA CGATTACTGA AGAAGCTGAT
CTTCCACTGA AAATGACGGC ACATACACCG TGTTTCCGTT CTGAAGCAGG ATCTTACGGT
CGTGATACTC GTGGTCTTAT TCGTATGCAC CAATTCGACA AAGTTGAATT AGTTCAAATC
ACGAAACCAG AAGATTCAAT GGCTGCTCTT GAAGAACTAA CAGGTCATGC TGAGAAAGTA
CTTCAACTGC TTGAACTTCC TTACCGTAAA GTGATTCTTT GTACTGGTGA TATGGGCTTC
GGTTCTCGTA AAACATACGA CTTAGAAGTA TGGGTTCCAG CACAAGAAAC GTACCGTGAG
ATTTCTTCTT GTTCAAACAT GTGGGATTTC CAAGCGCGTC GTATGCAAGC GCGTTTCCGT
CGTCAAGGTG AGAAGAAACC AGAATTGGTT CATACACTAA ACGGTTCTGG TCTTGCTGTA
GGTCGTACAA TGGTTGCGAT TCTAGAGAAC TTCCAACAAG CTGATGGCAA AATTGCAATT
CCTGAAGTAC TGCGTAAGTA CATGAATGGT GTTGAGTTCA TCGGTTAA
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| Protein sequence | MLDSKLLRTE LDETAEKLAR RGFKLDVETL RTLEEQRKSL QVITEDLQAQ RNSRSKSIGQ
AKAKGDHEEA DRIMADVATL GSELDDAKAG LAELQQQIES IALSVPNLPD ESVPYGKDED
ENVEVLRWGT PLTYDFEVRD HVALGELADG LDFASAVKIS GSRFIVMKGQ FARLHRALSQ
FMLDLHTEEH GYMEMYVPYL VNHDSLYGTG QLPKFGEDLF HTSPLTEQVS DVPLKMLSLI
PTAEVPVTNM VRDTITEEAD LPLKMTAHTP CFRSEAGSYG RDTRGLIRMH QFDKVELVQI
TKPEDSMAAL EELTGHAEKV LQLLELPYRK VILCTGDMGF GSRKTYDLEV WVPAQETYRE
ISSCSNMWDF QARRMQARFR RQGEKKPELV HTLNGSGLAV GRTMVAILEN FQQADGKIAI
PEVLRKYMNG VEFIG
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