| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1843 |
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| Symbol | |
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| ID | 6987416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1978120 |
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| End bp | 1979466 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380142 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_002263239 |
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| Protein GI | 209695310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0939319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAATT TCAGTTTAGA TTTTTCAGCA GGGGACGATT TTCGTCCCCT TGCTGCTAGA
ATGCGCCCTC AAAATATTGA GCAATATATT GGTCAACAGC ATTTATTAGC GGTGGGTAAA
CCATTACGTC GCGCGCTTGA AGCTGGCCAA ATACATTCAA TGATTTTATG GGGGCCTCCG
GGTACCGGTA AAACAACGTT AGCGGAAGTT GCTGCAAATT ACGCAAATGC AGAAGTTGAG
CGTGTTTCTG CTGTGACGTC TGGCGTAAAA GATATTCGAG CGGCGATTGA CAAAGCCAAA
GAAAATCAAA CGACAGGCCG CAGAACGATT TTATTTGTGG ATGAAGTTCA TCGCTTTAAT
AAAAGTCAGC AAGATGCGTT TTTGCCTCAT ATCGAAAATG GGACAATCAC GTTTATTGGT
GCGACAACGG AAAACCCGTC TTTTGAGCTA AACAATGCAT TATTATCTAG AGCTCGGGTA
TACAAATTAA AATCATTAGA AAAACAAGAT ATTGTACAGA TTATCGAACA AGCATTGACC
GATAAAAATC GCGGCTTAAA TGACGATAAT TTTGTTCTTC CTGATGACGT AAAATTGCAA
TTAGCTGATT TAGTGTCTGG TGACGCTCGC ATGTCTCTAA ATTATTTAGA GTTGTTGCAT
GATATGGCAG AAGAAAACCA CGAAGGTAAA AAAGTGGTGG ATTTACCTTT ATTAGCGGAA
GTTGCCGGTG AAAAACTGGC ACGTTTCGAT AATAAAGGTG ACATGTGGTA TGACTTAATC
TCAGCGGTTC ATAAATCGAT TCGTGGTTCA AATCCGGATG CCGCTTTGTA TTGGGCAGCA
CGAATTATGG CAGCAGGGGG CGATCCTCTG TATGTAGTAC GTCGATTATT AGCGATTGCA
TCAGAAGATA TTGGTAACGC TGATCCACGA GCAATGGAAG TGGCTTTGAA TGCATGGGAT
TGTTTTACTC GACTTGGTCC TGCAGAAGGC GAAAGAGCGA TAGCACAAGC GGTCGTCTAT
TTAGCGTGTG CACCAAAAAG TAATGCAGTT TATACCGCAT GGAAACAAGC ACAAATGGAT
GCGATTAACT CGCCGGATTA TGATGTGCCT AATCACCTAC GTAACGCGCC AACCTCATTA
ATGAAAGACA TGGGTTATGG TGCTGATTAT CGTTATGCGC ATGATGAACC TAATGCATAC
GCTTCTGGTG AGAACTATTT CCCACCAGAA ATGCAGGATC GCAAGTACTA CTTTCCAACA
AAACGTGGTC TAGAAACCAA AATTAGTGAA AAGCTAGAGT ATTTAGCCCA ATTAGATCAA
AACAGTCCCT TAAAACGCTA CCAATAA
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| Protein sequence | MSNFSLDFSA GDDFRPLAAR MRPQNIEQYI GQQHLLAVGK PLRRALEAGQ IHSMILWGPP
GTGKTTLAEV AANYANAEVE RVSAVTSGVK DIRAAIDKAK ENQTTGRRTI LFVDEVHRFN
KSQQDAFLPH IENGTITFIG ATTENPSFEL NNALLSRARV YKLKSLEKQD IVQIIEQALT
DKNRGLNDDN FVLPDDVKLQ LADLVSGDAR MSLNYLELLH DMAEENHEGK KVVDLPLLAE
VAGEKLARFD NKGDMWYDLI SAVHKSIRGS NPDAALYWAA RIMAAGGDPL YVVRRLLAIA
SEDIGNADPR AMEVALNAWD CFTRLGPAEG ERAIAQAVVY LACAPKSNAV YTAWKQAQMD
AINSPDYDVP NHLRNAPTSL MKDMGYGADY RYAHDEPNAY ASGENYFPPE MQDRKYYFPT
KRGLETKISE KLEYLAQLDQ NSPLKRYQ
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