| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1842 |
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| Symbol | lolA |
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| ID | 6987415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1977479 |
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| End bp | 1978075 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380141 |
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| Product | outer-membrane lipoprotein carrier protein |
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| Protein accession | YP_002263238 |
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| Protein GI | 209695309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.153772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGAAAA TTTTATTATC ATTGTGTTTT TTAAGTTCTG TTGCTTTTGC TTCTCCACAA
GGTGAATTAA CGGATCGTTT GAATCAAAAT AAAGGTTTTG AAGCGTCATT TACACAAAAA
GTGTTGAGCC CTGAAGGGGA TGTATTGATG CAAGGCGAAG GGGATGTGAA AATTTTGCGT
CCTAACTTGT TCCGCTGGCA TACTCAAACT CCGGATGAAA ACCTATTAGT GACCGATGGA
AAAACATTGT GGTACTACAA TCCATTTGTA GAACAAGTGA CTCTTATGGG ATTAGATCAA
GCGACAACTC AAACTCCTTT TGTTTTATTA ACACGCAATA AAGCGTCTGA TTGGGATAAC
TACTCAGTAG CTCAAAACGG TGATGCATTT ACGGTTTCAC CAAAATCAGA TTCTGCTATA
AAAAGTGAAT TCATCGTTCG TATTCAACCG TCAGGTAAAG TAACGGGGTT TTCAGTTGTA
GAGCAAGATG GGCAGCGTAG CGATTTTAAT TTCACAACGT TTGAAGCGAA AAAGCCAGCC
CAATCTAATT TTATGTTCAC TGTCCCTGAT GGTGTAGATA TTGATGATCA GCGTTAA
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| Protein sequence | MKKILLSLCF LSSVAFASPQ GELTDRLNQN KGFEASFTQK VLSPEGDVLM QGEGDVKILR
PNLFRWHTQT PDENLLVTDG KTLWYYNPFV EQVTLMGLDQ ATTQTPFVLL TRNKASDWDN
YSVAQNGDAF TVSPKSDSAI KSEFIVRIQP SGKVTGFSVV EQDGQRSDFN FTTFEAKKPA
QSNFMFTVPD GVDIDDQR
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