Gene VSAL_I1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1830 
Symbol 
ID6987409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1958017 
End bp1959168 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content40% 
IMG OID643380132 
Producthypothetical protein 
Protein accessionYP_002263229 
Protein GI209695300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTC ATGTTGGCAT TATGGATCAA GACCCTGTCC GTCTTGTGAC TCCACTTCTC 
GACCTTTCTG TAAAAGGCGA ACATATGATT TTCATTGGGG ATGAAAATCA AAAAGACATG
TTCGTTCGTT TAGAATCTAT TCTTCAATAC AAAGGCATTA GCTCTGAGTT TTACGAAATC
CCTAATATCG TAGATACTCA TCTTATCAAG CAATCTCTAC AAGCGCTTGC GGCTGATATT
AAAGACAGAT ACAGCGAAGT AAAACTGAAC GCAAGCTGTG GCCTTCGTCA CCGTCTTCTT
TCTGCTTATG AAGTTTTTCG TTCATACCAT TGGCCTATTT TTGTGGTTGA ACCTTTCAGT
GACAAACTAT GCTGGGTTTA TCCTGATGGT CGCAAACAAA AACACGTTGC TGATAATATT
CGATTAAGTG ATTATCTTGC TATTTTTGGT GCTCGTTGTG AGTTCTCTGA AACCGAGCTT
CCTGAAAGCA TGGATAAGCG TCTGCGTGAA TTATGTCAAC GCTGGGCAAG TAACGCTCTT
GAATTGGGCC CAGGTCTTGC GACGCTAAAC TATTTAGCAA CAACCTGTCG AAAAGAACAA
CGTTTAGATG TAGAAGTTAC GGAGAAACAA CAAAGCTACA AAGAGCTTAA TATGTTGCTA
ACTGATCTTG TTGAAACAGG ATTAGCTACC TACGAAAACG GCACATTAAC TTTTGATTGT
GAAGAAGCTC GACGTTTAGC GAATGGAGAA TGGTTAGAAA TTTTGGTTCA TAATACCGTC
GTCGATATCC AACAATATTT ACCGACGCTT CAAGATCACT CATTGAATGT ACAAGTTCAC
CGTGAAATTG GCACAAAAGA CGTTCGTAAT GAACTTGATG TGGTTAGTAT CGTGAATAAC
AAGCTGCATA TTATTGAATG TAAGACCAAA GGCATGCGTG ATGATGGCGA TGATACGCTT
TATAAATTAG AGTCATTACG TGACCTTCTT GGCGGCTTAC AAGCACGAGC AATGTTAGTT
AGTTTCCGAC CTTTACGTAA TAATGACATT ATGCGAGCAC AAGATTTAGG CTTAGCGATC
ATTGGTCCTG ATGAATTAGG CGATCTTAAA AAGCATCTCT TAAACTGGTT CTTAGCCGCT
GGCGGTCATT AA
 
Protein sequence
MITHVGIMDQ DPVRLVTPLL DLSVKGEHMI FIGDENQKDM FVRLESILQY KGISSEFYEI 
PNIVDTHLIK QSLQALAADI KDRYSEVKLN ASCGLRHRLL SAYEVFRSYH WPIFVVEPFS
DKLCWVYPDG RKQKHVADNI RLSDYLAIFG ARCEFSETEL PESMDKRLRE LCQRWASNAL
ELGPGLATLN YLATTCRKEQ RLDVEVTEKQ QSYKELNMLL TDLVETGLAT YENGTLTFDC
EEARRLANGE WLEILVHNTV VDIQQYLPTL QDHSLNVQVH REIGTKDVRN ELDVVSIVNN
KLHIIECKTK GMRDDGDDTL YKLESLRDLL GGLQARAMLV SFRPLRNNDI MRAQDLGLAI
IGPDELGDLK KHLLNWFLAA GGH