Gene VSAL_I1820 details

Gene Information

• Locus tag: VSAL_I1820
• ID: 6987399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1944970
• End bp: 1947069
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643380124
• Product: putative lipoprotein
• Protein accession: YP_002263221
• Protein GI: 209695292

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0873981
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTAA GAACAATTTT TATTATTGTA TTATCAAATT TGCTTTTTGC TTGTGGTGGA 
GAGAACAGCG GAGCACCATC CCAAGGTAAA CGCACTGAAA ATTGGAATGT ACCTTTAGCG 
CAGTCAGTGG CAGTTCAAGG TGACGTATTT TCTGGAAAAA CAATAAATGG TAATTACACA 
TACTTTGACC CAAATTCAAA AGCTCGCCCA GAAAATTTAA GCGAATTTAG GTGGGTGATT 
GATAATGTTA CTAAAAGTAC ATCCCTATCA TTTGATCTTC TTGATGAGCA TGTAGGAAAG 
GATGTTGTTT TTTGTATTAC ACCAATAGCC CTTGGAAACG TTAATTTTGT TGGTGATGAA 
GTTTGTAGTT TATCGGTAAC GGTTAATACT CCAAGTTCAA ATGTAGTACC TGAAGCATTA 
AATGTAGCGA TTAATCCAGA GGTAAATCTG ATTGCTGGAG ACAAAATATC ATCATCTTAT 
GTTTATTATG ATCAAGATAA TGATGCAGAA TTGAACAGTA AGTTGTTATG GTTTATTGAT 
GACATATTAG TGCAAACTGG TGGGGTTGAT TTTGATTTGC CAGCGGACGC AGAATATAAA 
ATATTGAAAT TTTGTGTAAC GCCAATATCG AATGCGTCTC CGACAACAGG AGTTCAAGTT 
TGTACACAGT CGGATCAAGT AAAGCCTAAA GTGGGTTCTG TACCTGTTGC AAATAATGTA 
TCAATTACTG GTGCTCTTAC ATCAGGCACT AATCTTGTGG GTTCATATTT ATATACAGAT 
ATAGATGGTG ATTTAGAAGG CATATCATTA TTTAAGTGGC AACTATCGGG TGTTGACATT 
AGTGGTGTCT CTATAAATAG TTATACTCCA TCAGTTACTG ATGAAGGAGA AACACTCAGT 
TTTTGTGTTA CACCTGTAGC GAGTACTGGT GAACCAAAAA TAGGGCTTGA AGCTTGTTAT 
AATGCGGGTA TTATCTCGCC TCCTTTGGGG TTCCCTCCCT CAGCAACGGT TTCAATTAAT 
AATAACTCAA ATTCTCCAGT CGCTGGTTTT AGATTACCTG CTACATATAC TTATATTCCA 
GGTATAGATG GACTTGCTCA AGGTAGCTCT ATTGTTACAT GGAGTGTTGA TGGTGTGGAT 
TCTGGTGTTA CTTGTTACCC ATTTGCAATT CCTTGTAATT ATACAATCAA AGATAATGAT 
GCAGGGAAAG TAATACAATA TTGTGTTACA CCAGTGAATG TTAATGGTGC GAGTGGTAGC 
AAAGTATGTG AGGATATCGT TGGAACATCT ATTAAATATA GCGGTAACTT TAATCTATTT 
GAGAATATTA ATGTTAGTTT GCAAGGGTAC TCTAATAATA TCAAAACCAG TTGGGGAGTC 
ACATCAAGTT TTGGTATTCA AGACCTACAA AGTACAGGGT TAACATATAA AATAGAATAT 
TTAGATAAGC TAGGGTTTAC AAGTTTAGCT TACGAACTTG TTAGTCAAGA TATTGAGTTT 
TGTGTTGAAG ATCTTGATAA AAGCTACAAT AAGTATTGTC GCCGAGTATC TGATGATTCA 
TCAAGTCAAT ATCTAACGGT TAGTGATGGT ACTTTTGTTG GGGGGGGGGT TGTGAACCGA 
TATAACACAC CTAAAGGCAT TGCCCCTGCG ACAGTATATC AAGATATGAC AACAGGTCTT 
AAATTCATGA GACCATTAAC TCCGGAAGAA TCTGAATTTG TCGGTGTAAT TGCTGATAGT 
ACTATGGGAG ATGGGAACGT AATTATAGCT CATTATTCTT TAGCTAACGC AAGGCAATTA 
TGTTCTTTAC TACCCGTTGA TGGTGGGGGA TGGCGTTTAC CAACATTTGA TGAATTACGT 
AACTTTAATA CTAACTTATC AACGTATAAT AACCTAGTTG TTGGTAGCAG TCCTCCCGCT 
ACTTTATCTT CACTTACCTA TGAGTTAGGT TGGAGGGGGT TACGTGCAAT ATGGAGTGGT 
ATTGGGTATT CATTACGGGC ATCTGATGGG AGATTGTATA ATACTCAACC TTATGCTGAG 
GGAGAGGTTT CCATTGCAGA TCAAGATACT AAATTTTTTG CAGTAACTTG CGTTAAGTAA 

 

Protein sequence

MKLRTIFIIV LSNLLFACGG ENSGAPSQGK RTENWNVPLA QSVAVQGDVF SGKTINGNYT 
YFDPNSKARP ENLSEFRWVI DNVTKSTSLS FDLLDEHVGK DVVFCITPIA LGNVNFVGDE 
VCSLSVTVNT PSSNVVPEAL NVAINPEVNL IAGDKISSSY VYYDQDNDAE LNSKLLWFID 
DILVQTGGVD FDLPADAEYK ILKFCVTPIS NASPTTGVQV CTQSDQVKPK VGSVPVANNV 
SITGALTSGT NLVGSYLYTD IDGDLEGISL FKWQLSGVDI SGVSINSYTP SVTDEGETLS 
FCVTPVASTG EPKIGLEACY NAGIISPPLG FPPSATVSIN NNSNSPVAGF RLPATYTYIP 
GIDGLAQGSS IVTWSVDGVD SGVTCYPFAI PCNYTIKDND AGKVIQYCVT PVNVNGASGS 
KVCEDIVGTS IKYSGNFNLF ENINVSLQGY SNNIKTSWGV TSSFGIQDLQ STGLTYKIEY 
LDKLGFTSLA YELVSQDIEF CVEDLDKSYN KYCRRVSDDS SSQYLTVSDG TFVGGGVVNR 
YNTPKGIAPA TVYQDMTTGL KFMRPLTPEE SEFVGVIADS TMGDGNVIIA HYSLANARQL 
CSLLPVDGGG WRLPTFDELR NFNTNLSTYN NLVVGSSPPA TLSSLTYELG WRGLRAIWSG 
IGYSLRASDG RLYNTQPYAE GEVSIADQDT KFFAVTCVK