| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1816 |
|---|
| Symbol | |
|---|
| ID | 6987395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1938973 |
|---|
| End bp | 1939746 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643380121 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_002263218 |
|---|
| Protein GI | 209695289 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.184981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT CAAATGAAAA ATTAACCAAA TTATGGGCAA CTAAAAATAA GGACGACGAA
TGGTGGTCAT CTTTTGTGAC TTCACCATTA GCTATTTTTG CTAATTATTT TGTCGTTGAT
ATTAAGTGGT TAACCCCAAA TATTATTACT TTACTGTCAT TTCTAGTTGC TCTCGTTTCA
GTCGCGCTTA TTGTTATTGG TGGCCACATT AACTTTGTTA TCGCTGCTTT TTTAATACAA
TTTAGTCATA CACTTGATTG CATGGATGGT CAGATGGCGC GCTTTCGTAA AACCAGTTCT
CCTACTGGCA GTTACTATGA CAAATTGACA GATCACCTTC AAGTAGCGCT TTGGTTCGGC
GCTGTAGGTT ATGCAGCTTA CGATCAAACA CAAAGTATAA CGCCTCTATT GTTAGCCTTC
GCCGGAGTCA CTTTCTATTC TTTACGTGGC TATTCAAAAT ATATGTTCCT TTACACAAAA
ATGCAGAATG ATTCTGACCA GATAAAGCAA ATACCCGCCA AAGACACAAC CGAACCAACG
ATTGAAAAAG CGGGTATAAG TTTCAGCACA GCAGAGAATC TTCGTTGGTT CTTCAACGAA
CAACGCAAAA TTGTATTTTT CAATGAAGGC GTATTTATCT TTATGTTATC CGCAGCATTA
ATCTTCAATG TCTTAACGCC GATGTTAATT CTATTTGCTC TCAGTCAGTT TATTTATGCC
ATAAAACGAA GTTTGAGCCA AATAGCGCAA TTGAAAGAAC AAAATCAAAA CTAG
|
|---|
| Protein sequence | MNISNEKLTK LWATKNKDDE WWSSFVTSPL AIFANYFVVD IKWLTPNIIT LLSFLVALVS
VALIVIGGHI NFVIAAFLIQ FSHTLDCMDG QMARFRKTSS PTGSYYDKLT DHLQVALWFG
AVGYAAYDQT QSITPLLLAF AGVTFYSLRG YSKYMFLYTK MQNDSDQIKQ IPAKDTTEPT
IEKAGISFST AENLRWFFNE QRKIVFFNEG VFIFMLSAAL IFNVLTPMLI LFALSQFIYA
IKRSLSQIAQ LKEQNQN
|
|---|
| |