Gene VSAL_I1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1807 
Symbol 
ID6987386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp1930948 
End bp1931625 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content40% 
IMG OID643380114 
Producthypothetical protein 
Protein accessionYP_002263211 
Protein GI209695282 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.162476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTT TGCACGGTTT TGCCGCTAGT AACTATTACA ACCTAGTGAA ACATGTACTT 
CTATACAAGC AACTGCCATT CCAAGAAAAT CTCATTTACG GTGGTAGTGA TGAGCTATTA 
ACAATCAGTC CTGCGGGAAA AGTACCTGCT ATAACAACGC AAGAAGGCCT TCATCTTTCA 
GAGTCGAGTG TTATTTGTGA TTTTATAGAA GAGACATTCC CTGCGACTCC GCTATACCCT 
GAAAATGCAG GCGAACGTGC AGTTATTCGT CAAATAATGA ACATAGCAGA GCTTTATTTG 
GAATTACCAA GCAGACGATT TATACCCTAT GTATTGTCAG GTACTGACGT TCCAGAACCC 
GTTAAAGCCG AAGTACGCCA AGTATTAACA CGTGGAGTCA CAGCCTTAAG TAGTTTGTGT 
CAATTCACGC CTTGGATTGC AGGTGAAGAA TTAACGATGG CTGATATCTA CGTTTATTAT 
ATCAACATCA TTGTAAGCAC TTTTGGTTCT AGCCAACTTG ACTGGGACAT ACTTGCAGAA 
GTACCAGGAA TGAAAGCATG GAACGATTCT ATGAGCCAGT CGATCATTGC TCAAAACGTA 
GAAGTCGATC GCCAGGCAAA CATCCCTGAA TTTACCCAAA AAATAAAAGC TCAAATTCAA 
GCAGCAAAGA CTAAATAA
 
Protein sequence
MIILHGFAAS NYYNLVKHVL LYKQLPFQEN LIYGGSDELL TISPAGKVPA ITTQEGLHLS 
ESSVICDFIE ETFPATPLYP ENAGERAVIR QIMNIAELYL ELPSRRFIPY VLSGTDVPEP 
VKAEVRQVLT RGVTALSSLC QFTPWIAGEE LTMADIYVYY INIIVSTFGS SQLDWDILAE 
VPGMKAWNDS MSQSIIAQNV EVDRQANIPE FTQKIKAQIQ AAKTK