Gene VSAL_I1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1796 
Symbol 
ID6988149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1917737 
End bp1919119 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content43% 
IMG OID643380103 
Productsodium/alanine symporter 
Protein accessionYP_002263200 
Protein GI209695271 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.466203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCT TTCACAACAC ACTTGTTACC GTTGATAATT TCATTTGGGG TCCACCTCTG 
TTGATGTTAT TGGTTGGTAC AGGTATCTAC TTTACGTTCC GACTTCGTAT ATTCCAACTA
CGTCATTTGC CAACCGCGCT TAAAATGGTC TTCTCAAAAG AAGAAAATGA AAGCAAGGGG
AAAGGCGATG TTTCAAGCTT TGCCGCTTTA TGTACTGCGC TCTCTGCCAC TATTGGTACG
GGTAATATTG TTGGTGTTGC AACCGCGATT AAAATGGGTG GCCCAGGCGC TCTATTTTGG
ATGTGGCTTG CTGCCGTTTT TGGTATGGCA ACAAAATATG CAGAATGTTT ACTGGCGGTA
AAATTCAGAA AAACAGACAG CAACGGCCAA ATGATTGGCG GCCCAATGTA TTACATTGAG
TATGGCATGG GCAATAAATG GCTCGCTAAA CTGTTTGCCT TATTCGCGTT AGGCGTGGCT
TGTTTTGGTA TCGGTACTTT TCCACAAATT AACGCCATTG TTGAATCAGC GCAATTAACC
TTAAATTCAC CCGCATGGTT AACTGGCGGT ATTTTAACCG TATTGGTAGC GATTGTGACC
CTTGGCGGTA TTCAATCGAT TGCTAAAGTT GCAGAGAAAG TCGTCCCAAC GATGGCGGTG
ATTTATGTTG TGTCTTGTCT TACGGTATTA GTGATGCAAG CAGAAGCCGT ACCTGCGGCG
CTTCAATTAG TCATTACCTC TGCATTTACA GGAACCGCAG CCACTGGTGG CTTTATCGGT
GCCTCTATTA TGCTGGCCAT TCAATCTGGT GTTGCTCGTG GTGTATTCTC AAACGAATCG
GGTTTGGGTA GTGCCCCTAT CGCAGCTGCT GCTGCAAAAA CAGATTCTTG TGTTAAACAG
GGACTAGTAT CGATGACTGG TACGTTCTTT GATACCGTGA TTATCTGTAC AATGACAGGC
TTAACATTGA TTGTTACCGG AGTCTGGCAA GGTGATGCTG CGGGTGCACT AATGACCACA
CAAGCTTTTG CTATTGGTTT AGGCTCTGAC CAAATTGGCC CTTACCTTGT GTCCGTCGGT
TTGATGTTCT TCGCCTTTAC GACCATTTTA GGTTGGAACT ATTACGGCGA ACGTTGTGTC
ACCTATTTAT TTGGTAATAA AGGGGTTTTA CCTTACAAAA TCATTTTTAT CTCTTTAGTG
GCTTCAGGTG CTTATATGCA TTTAGACACT ATCTGGGTGA TTGCCGATAT TGTAAATGGC
TTAATGGCGA TCCCAAATTT GATTGGTTTA ATCGCGCTTC GCCATATAAT TATTGAAGAA
ACGCACCTTT TCTTTAATCA AACAGACAAT AAGAAAAAGA AATCGGTATT AACTAACGCA
TAG
 
Protein sequence
MNTFHNTLVT VDNFIWGPPL LMLLVGTGIY FTFRLRIFQL RHLPTALKMV FSKEENESKG 
KGDVSSFAAL CTALSATIGT GNIVGVATAI KMGGPGALFW MWLAAVFGMA TKYAECLLAV
KFRKTDSNGQ MIGGPMYYIE YGMGNKWLAK LFALFALGVA CFGIGTFPQI NAIVESAQLT
LNSPAWLTGG ILTVLVAIVT LGGIQSIAKV AEKVVPTMAV IYVVSCLTVL VMQAEAVPAA
LQLVITSAFT GTAATGGFIG ASIMLAIQSG VARGVFSNES GLGSAPIAAA AAKTDSCVKQ
GLVSMTGTFF DTVIICTMTG LTLIVTGVWQ GDAAGALMTT QAFAIGLGSD QIGPYLVSVG
LMFFAFTTIL GWNYYGERCV TYLFGNKGVL PYKIIFISLV ASGAYMHLDT IWVIADIVNG
LMAIPNLIGL IALRHIIIEE THLFFNQTDN KKKKSVLTNA