Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1796 |
Symbol | |
ID | 6988149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1917737 |
End bp | 1919119 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380103 |
Product | sodium/alanine symporter |
Protein accession | YP_002263200 |
Protein GI | 209695271 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.466203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCT TTCACAACAC ACTTGTTACC GTTGATAATT TCATTTGGGG TCCACCTCTG TTGATGTTAT TGGTTGGTAC AGGTATCTAC TTTACGTTCC GACTTCGTAT ATTCCAACTA CGTCATTTGC CAACCGCGCT TAAAATGGTC TTCTCAAAAG AAGAAAATGA AAGCAAGGGG AAAGGCGATG TTTCAAGCTT TGCCGCTTTA TGTACTGCGC TCTCTGCCAC TATTGGTACG GGTAATATTG TTGGTGTTGC AACCGCGATT AAAATGGGTG GCCCAGGCGC TCTATTTTGG ATGTGGCTTG CTGCCGTTTT TGGTATGGCA ACAAAATATG CAGAATGTTT ACTGGCGGTA AAATTCAGAA AAACAGACAG CAACGGCCAA ATGATTGGCG GCCCAATGTA TTACATTGAG TATGGCATGG GCAATAAATG GCTCGCTAAA CTGTTTGCCT TATTCGCGTT AGGCGTGGCT TGTTTTGGTA TCGGTACTTT TCCACAAATT AACGCCATTG TTGAATCAGC GCAATTAACC TTAAATTCAC CCGCATGGTT AACTGGCGGT ATTTTAACCG TATTGGTAGC GATTGTGACC CTTGGCGGTA TTCAATCGAT TGCTAAAGTT GCAGAGAAAG TCGTCCCAAC GATGGCGGTG ATTTATGTTG TGTCTTGTCT TACGGTATTA GTGATGCAAG CAGAAGCCGT ACCTGCGGCG CTTCAATTAG TCATTACCTC TGCATTTACA GGAACCGCAG CCACTGGTGG CTTTATCGGT GCCTCTATTA TGCTGGCCAT TCAATCTGGT GTTGCTCGTG GTGTATTCTC AAACGAATCG GGTTTGGGTA GTGCCCCTAT CGCAGCTGCT GCTGCAAAAA CAGATTCTTG TGTTAAACAG GGACTAGTAT CGATGACTGG TACGTTCTTT GATACCGTGA TTATCTGTAC AATGACAGGC TTAACATTGA TTGTTACCGG AGTCTGGCAA GGTGATGCTG CGGGTGCACT AATGACCACA CAAGCTTTTG CTATTGGTTT AGGCTCTGAC CAAATTGGCC CTTACCTTGT GTCCGTCGGT TTGATGTTCT TCGCCTTTAC GACCATTTTA GGTTGGAACT ATTACGGCGA ACGTTGTGTC ACCTATTTAT TTGGTAATAA AGGGGTTTTA CCTTACAAAA TCATTTTTAT CTCTTTAGTG GCTTCAGGTG CTTATATGCA TTTAGACACT ATCTGGGTGA TTGCCGATAT TGTAAATGGC TTAATGGCGA TCCCAAATTT GATTGGTTTA ATCGCGCTTC GCCATATAAT TATTGAAGAA ACGCACCTTT TCTTTAATCA AACAGACAAT AAGAAAAAGA AATCGGTATT AACTAACGCA TAG
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Protein sequence | MNTFHNTLVT VDNFIWGPPL LMLLVGTGIY FTFRLRIFQL RHLPTALKMV FSKEENESKG KGDVSSFAAL CTALSATIGT GNIVGVATAI KMGGPGALFW MWLAAVFGMA TKYAECLLAV KFRKTDSNGQ MIGGPMYYIE YGMGNKWLAK LFALFALGVA CFGIGTFPQI NAIVESAQLT LNSPAWLTGG ILTVLVAIVT LGGIQSIAKV AEKVVPTMAV IYVVSCLTVL VMQAEAVPAA LQLVITSAFT GTAATGGFIG ASIMLAIQSG VARGVFSNES GLGSAPIAAA AAKTDSCVKQ GLVSMTGTFF DTVIICTMTG LTLIVTGVWQ GDAAGALMTT QAFAIGLGSD QIGPYLVSVG LMFFAFTTIL GWNYYGERCV TYLFGNKGVL PYKIIFISLV ASGAYMHLDT IWVIADIVNG LMAIPNLIGL IALRHIIIEE THLFFNQTDN KKKKSVLTNA
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