Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1785 |
Symbol | |
ID | 6987368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1902035 |
End bp | 1903423 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380092 |
Product | hypothetical protein |
Protein accession | YP_002263191 |
Protein GI | 209695262 |
COG category | [C] Energy production and conversion |
COG ID | [COG3488] Predicted thiol oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTT CAGTCGCTGG AACGCTTCTT CTGCTTATCG TTACTTCTTT TTCTGTGCAT TCTTCTGATG TTGCTTCTGG AGGAAAAACC AGTGTGCGAA AAGAAGGGGC AAATGCGTTT TCTTTACCTG CCGCCAATCT TCCAATGAGT AAGCGTTTAG ATTTTAGTGT GGGCAACAGT TTTTTTCGTA ACCCTTGGGT GCAAGCTCCT GCATCTACGG ATGCTAGAGA TGGATTAGGT CCATTATTCA ATACCAACGG TTGTCAAAAT TGCCATATTA AAGATGGTCG AGGTCATGCA CCAAGAGAAG GGGATACTAA TGCCGTTTCA ATGCTGGTGC GTTTAAGTAT TCCGGCATTA ACACCGGAGC AGAAAAAACG CGTAATTATT GAGGGTGTTA TTCCTGAACC TATCTATGGC GGACAGTTAC AAGATTTTTC GTTGTCTGGT GCAAAGCCTG AGGGCCAGAT ACACATTACT TACAGTGAAA AGAAAGTGCA GCTGTCTGAT GGTGACGTTG TCACTCTTCG TAAACCGAAC TTATCCATTA AAGAGTTAGC TTATGGGGAG ATGGATAAAA ATGTGCTGAT GTCTGCACGG GTTGCACCAC CCATGATTGG CTTAGGATTA TTAGAGTCAA TTCCTGAATC AACGATTCTA GAGTTTGCAA AAAAACAACA GGAGGACAAT AACGGCATCT CAGGGAAAGC GAATCGTGTA TGGGATGCAA AAAACGAAGC ATTGGTTTTA GGTCGATTTG GCTGGAAAGC GGGCCAACCG AGTTTAATGC AACAAAATGC GGCGGCATTT AATGGTGATC TTGGATTAAC CAGTAATTTA TTCCCGAAAG ATGATTGCAC TCAAGCTCAA ACTATTTGTG AAAAGCTACC CCATGGTGGT ACGCCAGAAG TGAGTGATAA GATCCTAAAC TTTGTTGAAT TTTATTCACA GCACCTTGCT GTTCCTATTC GTCGTAATGT AAAGGATCAT CAAGTGATCG TCGGTCAAAG AATCTTTAAA GACATTGGCT GTGAAAGTTG CCATCAATCG AATATTAAAA CCGCCAATAT TACGAACAGA CCTGCATTGT CGAATCAAAC CATTCATCCT TACACTGACA TGTTGTTGCA TGATATGGGG GAAGGGCTAG CCGATAATCG TCCCGAATTT TTAGCGGATG GACAGGAGTG GAGAACGCCA CCGTTATGGG GGTTAGGTTA CTTACAAGAA GTGAATGGAC ATACAGAGAT GTTGCATGAT GGGCGTGCTA GAAACGCCCT TGAAGCCATT CTATGGCACG GTGGTGAAGC GCAACAAAGC CGTGATGATG TCGTCAAACT ATCAACCCAA GATCGTAACG CATTACTCGC GTTTTTAGAG TCACTGTAA
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Protein sequence | MKSSVAGTLL LLIVTSFSVH SSDVASGGKT SVRKEGANAF SLPAANLPMS KRLDFSVGNS FFRNPWVQAP ASTDARDGLG PLFNTNGCQN CHIKDGRGHA PREGDTNAVS MLVRLSIPAL TPEQKKRVII EGVIPEPIYG GQLQDFSLSG AKPEGQIHIT YSEKKVQLSD GDVVTLRKPN LSIKELAYGE MDKNVLMSAR VAPPMIGLGL LESIPESTIL EFAKKQQEDN NGISGKANRV WDAKNEALVL GRFGWKAGQP SLMQQNAAAF NGDLGLTSNL FPKDDCTQAQ TICEKLPHGG TPEVSDKILN FVEFYSQHLA VPIRRNVKDH QVIVGQRIFK DIGCESCHQS NIKTANITNR PALSNQTIHP YTDMLLHDMG EGLADNRPEF LADGQEWRTP PLWGLGYLQE VNGHTEMLHD GRARNALEAI LWHGGEAQQS RDDVVKLSTQ DRNALLAFLE SL
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