Gene VSAL_I1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1760 
SymbolthrS 
ID6988717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1871587 
End bp1873515 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content43% 
IMG OID643380069 
Productthreonyl-tRNA synthetase 
Protein accessionYP_002263168 
Protein GI209695239 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000746645 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTAA TTACTCTTCC AGACGGTTCT CAACGTCAAT TCGATAATGC TGTTTCTACT 
ATGGATGTTG CTACTGACAT CGGTCCAGGT CTTGCGAAAG CTTGTATCGC TGGCCGTGTT
GATGGCGTTC GTGTTGATGC GTGTGATTTA ATTGAAAATG ACGCACAACT TGAAATCATC
ACAGCAAAAG ATGAAGACGG TTTAGAAATC ATTCGTCACT CTTGTGCGCA CCTTTTAGGT
CACGCAGTTA AGCAACTTTT CCCAGAAGCG AAAATGGCGA TTGGTCCAAC TATCGATAAC
GGTTTCTATT ACGACATCGA TATGGAGCAC TCTTTAACGC AAGACGATCT TGATAAGATT
GAAAAGCGCA TGAAAGAGCT TGCGAAAACT AAGTACCAAG TAATTAAGAA GAACGTAAGC
TGGCAAGAAG CTCGCGATGC ATTCGATGCT CGTGGCGAAA CTTACAAAAT TGCAATCCTT
GACGAGAACG TTTCTAAAGA CGACCGTCCA GGTTTATATC ATCATGAAGA ATACATCGAC
ATGTGTCGCG GTCCTCACGT CCCTAACATG AGCTTCTGCC AGAACTTTAA AATTCTGAGC
GTAGCGGGTG CATACTGGCG TGGTAACAGC GACAACAAAA TGTTGCAACG TATCTACGGC
ACTGCATTCC AAGATAAGAA ACTGCTTAAA GCACACCTTA TCCGCCTAGA AGAAGCCGCA
AAGCGTGATC ATCGTAAAAT TGGTAAGCAT CTTGACTTGT TCCACATGCA ACAAGAAGCG
CCAGGTATGG TTTTCTGGCA CCACAACGGT TGGACTATTT TCCGTGAGCT GGAAGTTTTT
GTTCGTGAAA AACTAACTGA ATACGATTAC CAAGAAGTAA AAGGCCCATT AATGATGGAG
CGTGTACTTT GGGAGCGTTC AGGGCACTGG GACAAATATG CAGAAGCGAT GTTCACAACA
AGCTCTGAGA ACCGTGAATA CGCGATTAAG CCAATGAACT GCCCAGGTCA CGTTCAAATA
TTTAATCAAG GTCTGAAGTC ATACCGTGAT TTACCACTGC GTATGGCTGA GTTCGGAGCG
TGTCATCGTA ATGAACCATC AGGCGCACTA CACGGCATCA TGCGTGTTCG TGGCTTTACT
CAAGATGATG CTCATATCTT CTGTACTGAA GCTCAAGTAC AAGATGAAGT GAAATCATGT
ATTGAGATGG TTTACGATAC ATACACGACA TTTGGTTTTG AAAACATTGT TGTTAAATTG
TCTACACGTC CTGAACAACG TGTTGGTTCT GACGAAATGT GGGACAAAGC AGAGGCCGAT
TTACAGCTTG CTCTAGAGTC AATGAACATT GCTTATGAGA TTCAAGAAGG TGAGGGTGCG
TTCTACGGAC CGAAAATTGA ATTTACTTTG CATGATTGTC TGGACCGTGC GTGGCAATGT
GGTACAGTGC AGCTCGATTT TGCATTACCA GAGCGTTTAG GAGCAACTTA CGTAGGTGAA
GATAACGAAC GTCACACACC AGTGATGATT CACCGCGCGA TTTTAGGTTC ACTTGAGCGC
TTCATCGGTA TCCTAATTGA AGACTACGCA GGCTTTTTTC CTACATGGTT GGCGCCAGAA
CAAGCGATTG TGATGGGTAT TACAGACAAA CAAGCTGATT ATGTACAAGA AATTGCAAAA
AAACTGCAAA AAAATGGATT TAGAGTCAAA GCGGACTTGA GAAATGAGAA GATTGGCTTT
AAAATCAGGG AACATACTTT GAAACGTGTT CCGTATATGC TTGTTTGTGG TGACCAAGAA
ATGGAAGCTG GCGAAATTGC AGTACGTACG CGTAAAGGTA AAGATTTGGG TAAATTTAAA
ATTGATGATT TTGTTGCATT CCTGCAGCAA GAAGTTAGTA CCCGAACGCT CAATACTGTG
GAGGAATAA
 
Protein sequence
MPVITLPDGS QRQFDNAVST MDVATDIGPG LAKACIAGRV DGVRVDACDL IENDAQLEII 
TAKDEDGLEI IRHSCAHLLG HAVKQLFPEA KMAIGPTIDN GFYYDIDMEH SLTQDDLDKI
EKRMKELAKT KYQVIKKNVS WQEARDAFDA RGETYKIAIL DENVSKDDRP GLYHHEEYID
MCRGPHVPNM SFCQNFKILS VAGAYWRGNS DNKMLQRIYG TAFQDKKLLK AHLIRLEEAA
KRDHRKIGKH LDLFHMQQEA PGMVFWHHNG WTIFRELEVF VREKLTEYDY QEVKGPLMME
RVLWERSGHW DKYAEAMFTT SSENREYAIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGA
CHRNEPSGAL HGIMRVRGFT QDDAHIFCTE AQVQDEVKSC IEMVYDTYTT FGFENIVVKL
STRPEQRVGS DEMWDKAEAD LQLALESMNI AYEIQEGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDFALP ERLGATYVGE DNERHTPVMI HRAILGSLER FIGILIEDYA GFFPTWLAPE
QAIVMGITDK QADYVQEIAK KLQKNGFRVK ADLRNEKIGF KIREHTLKRV PYMLVCGDQE
MEAGEIAVRT RKGKDLGKFK IDDFVAFLQQ EVSTRTLNTV EE