Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1760 |
Symbol | thrS |
ID | 6988717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1871587 |
End bp | 1873515 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380069 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_002263168 |
Protein GI | 209695239 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000746645 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTAA TTACTCTTCC AGACGGTTCT CAACGTCAAT TCGATAATGC TGTTTCTACT ATGGATGTTG CTACTGACAT CGGTCCAGGT CTTGCGAAAG CTTGTATCGC TGGCCGTGTT GATGGCGTTC GTGTTGATGC GTGTGATTTA ATTGAAAATG ACGCACAACT TGAAATCATC ACAGCAAAAG ATGAAGACGG TTTAGAAATC ATTCGTCACT CTTGTGCGCA CCTTTTAGGT CACGCAGTTA AGCAACTTTT CCCAGAAGCG AAAATGGCGA TTGGTCCAAC TATCGATAAC GGTTTCTATT ACGACATCGA TATGGAGCAC TCTTTAACGC AAGACGATCT TGATAAGATT GAAAAGCGCA TGAAAGAGCT TGCGAAAACT AAGTACCAAG TAATTAAGAA GAACGTAAGC TGGCAAGAAG CTCGCGATGC ATTCGATGCT CGTGGCGAAA CTTACAAAAT TGCAATCCTT GACGAGAACG TTTCTAAAGA CGACCGTCCA GGTTTATATC ATCATGAAGA ATACATCGAC ATGTGTCGCG GTCCTCACGT CCCTAACATG AGCTTCTGCC AGAACTTTAA AATTCTGAGC GTAGCGGGTG CATACTGGCG TGGTAACAGC GACAACAAAA TGTTGCAACG TATCTACGGC ACTGCATTCC AAGATAAGAA ACTGCTTAAA GCACACCTTA TCCGCCTAGA AGAAGCCGCA AAGCGTGATC ATCGTAAAAT TGGTAAGCAT CTTGACTTGT TCCACATGCA ACAAGAAGCG CCAGGTATGG TTTTCTGGCA CCACAACGGT TGGACTATTT TCCGTGAGCT GGAAGTTTTT GTTCGTGAAA AACTAACTGA ATACGATTAC CAAGAAGTAA AAGGCCCATT AATGATGGAG CGTGTACTTT GGGAGCGTTC AGGGCACTGG GACAAATATG CAGAAGCGAT GTTCACAACA AGCTCTGAGA ACCGTGAATA CGCGATTAAG CCAATGAACT GCCCAGGTCA CGTTCAAATA TTTAATCAAG GTCTGAAGTC ATACCGTGAT TTACCACTGC GTATGGCTGA GTTCGGAGCG TGTCATCGTA ATGAACCATC AGGCGCACTA CACGGCATCA TGCGTGTTCG TGGCTTTACT CAAGATGATG CTCATATCTT CTGTACTGAA GCTCAAGTAC AAGATGAAGT GAAATCATGT ATTGAGATGG TTTACGATAC ATACACGACA TTTGGTTTTG AAAACATTGT TGTTAAATTG TCTACACGTC CTGAACAACG TGTTGGTTCT GACGAAATGT GGGACAAAGC AGAGGCCGAT TTACAGCTTG CTCTAGAGTC AATGAACATT GCTTATGAGA TTCAAGAAGG TGAGGGTGCG TTCTACGGAC CGAAAATTGA ATTTACTTTG CATGATTGTC TGGACCGTGC GTGGCAATGT GGTACAGTGC AGCTCGATTT TGCATTACCA GAGCGTTTAG GAGCAACTTA CGTAGGTGAA GATAACGAAC GTCACACACC AGTGATGATT CACCGCGCGA TTTTAGGTTC ACTTGAGCGC TTCATCGGTA TCCTAATTGA AGACTACGCA GGCTTTTTTC CTACATGGTT GGCGCCAGAA CAAGCGATTG TGATGGGTAT TACAGACAAA CAAGCTGATT ATGTACAAGA AATTGCAAAA AAACTGCAAA AAAATGGATT TAGAGTCAAA GCGGACTTGA GAAATGAGAA GATTGGCTTT AAAATCAGGG AACATACTTT GAAACGTGTT CCGTATATGC TTGTTTGTGG TGACCAAGAA ATGGAAGCTG GCGAAATTGC AGTACGTACG CGTAAAGGTA AAGATTTGGG TAAATTTAAA ATTGATGATT TTGTTGCATT CCTGCAGCAA GAAGTTAGTA CCCGAACGCT CAATACTGTG GAGGAATAA
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Protein sequence | MPVITLPDGS QRQFDNAVST MDVATDIGPG LAKACIAGRV DGVRVDACDL IENDAQLEII TAKDEDGLEI IRHSCAHLLG HAVKQLFPEA KMAIGPTIDN GFYYDIDMEH SLTQDDLDKI EKRMKELAKT KYQVIKKNVS WQEARDAFDA RGETYKIAIL DENVSKDDRP GLYHHEEYID MCRGPHVPNM SFCQNFKILS VAGAYWRGNS DNKMLQRIYG TAFQDKKLLK AHLIRLEEAA KRDHRKIGKH LDLFHMQQEA PGMVFWHHNG WTIFRELEVF VREKLTEYDY QEVKGPLMME RVLWERSGHW DKYAEAMFTT SSENREYAIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGA CHRNEPSGAL HGIMRVRGFT QDDAHIFCTE AQVQDEVKSC IEMVYDTYTT FGFENIVVKL STRPEQRVGS DEMWDKAEAD LQLALESMNI AYEIQEGEGA FYGPKIEFTL HDCLDRAWQC GTVQLDFALP ERLGATYVGE DNERHTPVMI HRAILGSLER FIGILIEDYA GFFPTWLAPE QAIVMGITDK QADYVQEIAK KLQKNGFRVK ADLRNEKIGF KIREHTLKRV PYMLVCGDQE MEAGEIAVRT RKGKDLGKFK IDDFVAFLQQ EVSTRTLNTV EE
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