Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1759 |
Symbol | infC |
ID | 6989178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1871032 |
End bp | 1871583 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643380068 |
Product | translation initiation factor IF-3 |
Protein accession | YP_002263167 |
Protein GI | 209695238 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00206313 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTAAAGGCG GAAAAAGAGC CCAACAGCCG GCAAAACAAA ATGCTCATCG TCTAAACGGT GAAATTATTG GCGTTAAAGA AGTGCGCCTT ACAGGTCTAG ATGGCGAGTC AGTTGGCGTC GTTTCACTAA ATGAAGCGTT AGACGTTGCA CTTACAGCAG GTGTCGATCT AGTTGAAATC AGCCCGAATG CCGAGCCACC AGTCTGTCGT GTGATGGACT ATGGCAAATT CCTCTTCGAA AAGGCCAAGG CTGCTAAAGA ACAGAAGAAA AAACAGAAAC AGGTCCAAAC TAAAGAAATT AAATTTAGAC CTGGGACAGA TATTGGAGAC TATCAGGTAA AACTACGCAA CCTGACTGGT TTCCTGGAAG AAGGCAACAA GGTGAAGGTA ACAATTCGCT TCCGTGGCCG AGAGATGGCT CACCAAAACA TCGGTGTTGA CGTTCTTAAT CGTTTGAAAG CGGATACTGA AGAATTTGCA GTAGTCGAAT CATTTCCAAC GAGAATTGAA GGTCGCCAGA TGATTATGGT GTTAGCCCCT AAAAAGAAGT AA
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Protein sequence | MKGGKRAQQP AKQNAHRLNG EIIGVKEVRL TGLDGESVGV VSLNEALDVA LTAGVDLVEI SPNAEPPVCR VMDYGKFLFE KAKAAKEQKK KQKQVQTKEI KFRPGTDIGD YQVKLRNLTG FLEEGNKVKV TIRFRGREMA HQNIGVDVLN RLKADTEEFA VVESFPTRIE GRQMIMVLAP KKK
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