Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1756 |
Symbol | hmuV |
ID | 6988694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1869462 |
End bp | 1870244 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643380065 |
Product | hemin importer ATP-binding subunit |
Protein accession | YP_002263164 |
Protein GI | 209695235 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4559] ABC-type hemin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00991527 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTCA TCTCTACCGC TATTTCAGCA AAAAACATTA CCTGCTATTT AAATAATAAA TTAATTCTAG ATGATCTTAA TCTTGATCTT CATTGTGGAG AGGTAACCAC ACTACTTGGG CCTAATGGTG CAGGTAAAAG TACTCTTTTA AAAATCTTAT GCAATGAAAT AAGTTCCACT AACAATATTT CGTATTTTGG AAAAGAGAAA GGAAGATGGG AGCCTTGTTT ATTAGCAAAA AGACTAGGCG TATTACCTCA GCAGAGTTCT CTCTCTTTTG CTTTTACCGT CAGTGAAGTT GTTGAGCTTG GTGGGTTACC ATTGGCGTTG TCAAATAAAG ATCTCAGGAT CATTACTCAA ACAATGATGG AAAAAACAGG AATACATCAT TTAGCAGATA GACTATACCC CTCTCTTTCA GGGGGAGAGA AACAGCGCGT TCATTTTGCT AGGGTTTTAA CTCAAATCAG CCAATCTCAA CAGCAAAAAA TTGTAATGCT TGATGAACCA ACTTCTGCAT TAGATTTGTC ACACCAACAT AATACGTTAC GTTTAGCTAA AGAGCTTGCG AATGAAGGTG CTGCAGTGAT TATTGTATTA CACGATTTGA ACTTAGCAGC TCAATACTCA GATAGAGTTA TTGTGTTGCA AGATGGTACA TTACAAGCTG ATGGGACGCC ATGGGAAGCC ATTACACCAA CCATGATTGA ACAAGTTTAT GGGCACAAGA CATTCGTTCA AGCACACCCT ACCCTTAATT TCCCCGTTGT TTATGCAGCT TAA
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Protein sequence | MNLISTAISA KNITCYLNNK LILDDLNLDL HCGEVTTLLG PNGAGKSTLL KILCNEISST NNISYFGKEK GRWEPCLLAK RLGVLPQQSS LSFAFTVSEV VELGGLPLAL SNKDLRIITQ TMMEKTGIHH LADRLYPSLS GGEKQRVHFA RVLTQISQSQ QQKIVMLDEP TSALDLSHQH NTLRLAKELA NEGAAVIIVL HDLNLAAQYS DRVIVLQDGT LQADGTPWEA ITPTMIEQVY GHKTFVQAHP TLNFPVVYAA
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