| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1748 |
|---|
| Symbol | huvZ |
|---|
| ID | 6987349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1863104 |
|---|
| End bp | 1863634 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643380058 |
|---|
| Product | heme uptake and utilization protein HuvZ |
|---|
| Protein accession | YP_002263157 |
|---|
| Protein GI | 209695228 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0748] Putative heme iron utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAG ACATCAAAAA AGAACGTTTA CAAAATCGTT TAGAACCAGA AATTCAAGAG
TTTCGTGATT CAAAAAAAAC ACTTCAACTT GCTACGGTTG ATAGCGAAGG AAAGCCAAAC
GTGAGTTATG CACCTTTCGT ATTACTTAAT GATGGTTACT ACGTGTTAAT TTCAGAAATA
GCGCGTCACG CTCGTAATTT AATGCAAAAT ACAGACGTAT CTTTAATGCT TATTGAAGAT
GAAGAATCGT CAAAATTACT TTTTGCTCGT AAGCGTTTAA CTTTTGATGC GACAGCCATT
TTAATTGATC GTGATGAAGA TAAATGGCAA GAAGCCGTAA CTCAAATGAG ACTTCGTTTT
GGTGAAATAA TTGACGGGCT TAGCTCACTA GAGGACTTTA AAATGTTTCG TCTTAAGCCA
ATTAAGGGCT TGTTTGTAAA AGGTTTTGGT CAGGCATTTC AAGTAAGTGG TGATGACTTA
GTGGATTTTG TCCATTTAGA ACAAGGTCAT AAAAAGCACG AAAAAGCGTA A
|
|---|
| Protein sequence | MNQDIKKERL QNRLEPEIQE FRDSKKTLQL ATVDSEGKPN VSYAPFVLLN DGYYVLISEI
ARHARNLMQN TDVSLMLIED EESSKLLFAR KRLTFDATAI LIDRDEDKWQ EAVTQMRLRF
GEIIDGLSSL EDFKMFRLKP IKGLFVKGFG QAFQVSGDDL VDFVHLEQGH KKHEKA
|
|---|
| |