Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1733 |
Symbol | pheS |
ID | 6988971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1846340 |
End bp | 1847323 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643380048 |
Product | phenylalanyl-tRNA synthetase subunit alpha |
Protein accession | YP_002263147 |
Protein GI | 209695218 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000948245 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACATC TAGACGAGAT CATTGCCAAT GCAACGGCAG AAATTGAACA AGCAGGCTCT TTAGTCGCTC TGGACGAAGT CCGTGTTCAA TATTTAGGTA AAAAAGGGCA TTTGACACTT CAGCTTCAAG GTCTAGGAAA ACTAGATCCG ACAGAACGTC GTGAAGCGGG TCAATTGATC AATAAAGCGA AGCAGACTGT TCAAACGTTA TTAGGTGAGC GTAAAGACTC TCTTCAAACT GCAGAGCTTG AAGCGAAACT TGCTGCTGAA ACTATCGATG TAAGCCTTCC GGGCCGTCGT ATCGAGAACG GTGGTTTACA CCCAGTTACT CGTACCGTTG AGCGTATTGA GCAATTCTTT GGTGAGTTAG GCTTTAGTAC TGAGTCTGGT CCTGAGATCG AAGATGCATT CCATAACTTC GATGCATTGA ACATTGCTGA TGATCACCCT GCGCGTACTG ATCACGATAC GTTCTTCTTT AACCCTGATT TAATGCTGCG TACGCACACT TCAGGTGTTC AGATCCGTAC AATGGAAAAT GGCAAACCCC CATTCCGTTT CATCGCTCCG GGTCGTGTTT ACCGTAACGA TTACGATCAA ACTCACACAC CAATGTTCCA CCAAGTGGAA GGTATGTTAG TTGATGAGAA CGTAAACTTT GCACAACTTA AAGGTATTCT TCACGATTTC CTTTGTAATT TCTTTGAAGA AGAAGTTGAA GTGCGTTTCC GTCCTTCATT TTTCCCATTC ACAGAACCTT CTGCTGAAGT TGATGTGAAA CGTAAAGATG GCAAGTGGTT AGAAGTATTA GGCTGTGGCA TGGTTCACCC TAACGTACTT CGCTCTGTTG GCATCGACCC TGAAAAATAC TCAGGCTTTG CGTTTGGTAT GGGTGTTGAG CGTCTAACTA TGCTTCGTTA CGGCGTAAAT GACCTTCGTG CGTTCTTCGA GAACGACCTT CGTTTCCTTA AACAATTCAA GTAA
|
Protein sequence | MQHLDEIIAN ATAEIEQAGS LVALDEVRVQ YLGKKGHLTL QLQGLGKLDP TERREAGQLI NKAKQTVQTL LGERKDSLQT AELEAKLAAE TIDVSLPGRR IENGGLHPVT RTVERIEQFF GELGFSTESG PEIEDAFHNF DALNIADDHP ARTDHDTFFF NPDLMLRTHT SGVQIRTMEN GKPPFRFIAP GRVYRNDYDQ THTPMFHQVE GMLVDENVNF AQLKGILHDF LCNFFEEEVE VRFRPSFFPF TEPSAEVDVK RKDGKWLEVL GCGMVHPNVL RSVGIDPEKY SGFAFGMGVE RLTMLRYGVN DLRAFFENDL RFLKQFK
|
| |