Gene VSAL_I1727 details

Gene Information

• Locus tag: VSAL_I1727
• Symbol: aroH
• ID: 6987333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1838388
• End bp: 1839440
• Gene Length: 1053 bp
• Protein Length: 350 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643380042
• Product: phospho-2-dehydro-3-deoxyheptonate aldolase
• Protein accession: YP_002263141
• Protein GI: 209695212
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
• TIGRFAM ID: [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.544951
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATTGC AAACAGATGA ACTTCGTACT CAGCCTTTAG GCCCAATGCC TACTCCCGCT 
GAATTAACTG CTGCCTATCC TCTTACTGAC GATGTTGCCG AACACATTGA GCAATCTAGA 
GCTCAAGTTG AAGCAATTTT AACGGGTGAA GACAAACGAC TTTTAGTCAT TGTTGGCCCG 
TGCTCAGTAC ATGATACTAA AGCCGCAATG GACTACGCTG AACGTTTAGC TAAGATCCAA 
GAATCGTATA AAAATGAGCT TTTCATTGTT ATGCGTACGT ACTTTGAAAA ACCACGTACG 
ATTGTAGGTT GGAAAGGTCT TATTACCGAT CCAAACCTTG ATGGTAGTTA TGCTCTTGAG 
GCCGGTCTTC ATAAAGCACG TAAACTATTA CTGAACATAA ATAAACTGGG TTTAGCTACA 
GCGACTGAGT TTTTAGATAT GATCACTGGC CAATATATTT CTGACTTGAT CACGTGGGGT 
GCCATTGGCG CTCGTACTAC TGAGTCTCAA ATACACCGTG AAATGGCATC AGCCCTTTCT 
TGTCCTGTTG GATTTAAAAA CGGTACCAAT GGTAATACTC AGATTGCGAT GGATGCTATC 
CGCGCTTCTA AGGCTTCTCA TTACTTCTAC TCTCCAGATA AACAAGGCCG CATGACGGTA 
TACCGCACTG CTGGTAACCC TTTTGGTCAT GTTATCTTAC GTGGTGGTAG CGACAAACCA 
AACTATGATA TTGATTCTGT AACAGATGCC TGCAAACGGT TAGAAGAAGT AAATTTACCT 
CCTCATCTGA TCGTTGATTT TAGCCACGCT AACTGTGAGA AACAACACCG TCGTCAACTT 
GATGTTGCAA AAGATATTTG TAATCAAATT GAATCTGGCA GCAATCAAGT TGTTGGTATT 
ATGGCTGAAA GCTTTTTAAT TGAAGGCAAT CAACCAATGA CGGATTTAAA TAACCTAACT 
TATGGCCAAT CGATCACTGA TCCATGCCTA AGTTGGGAAG ATACTGTGAC TATGTTAGAC 
ATGCTATCAA ACTCTATTAA AACCTCTCGT TAA 

 

Protein sequence

MPLQTDELRT QPLGPMPTPA ELTAAYPLTD DVAEHIEQSR AQVEAILTGE DKRLLVIVGP 
CSVHDTKAAM DYAERLAKIQ ESYKNELFIV MRTYFEKPRT IVGWKGLITD PNLDGSYALE 
AGLHKARKLL LNINKLGLAT ATEFLDMITG QYISDLITWG AIGARTTESQ IHREMASALS 
CPVGFKNGTN GNTQIAMDAI RASKASHYFY SPDKQGRMTV YRTAGNPFGH VILRGGSDKP 
NYDIDSVTDA CKRLEEVNLP PHLIVDFSHA NCEKQHRRQL DVAKDICNQI ESGSNQVVGI 
MAESFLIEGN QPMTDLNNLT YGQSITDPCL SWEDTVTMLD MLSNSIKTSR