Gene VSAL_I1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1720 
Symbol 
ID6987327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1829028 
End bp1830104 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content41% 
IMG OID643380035 
Producttransposase 
Protein accessionYP_002263135 
Protein GI209695206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCCT GTGGGACAGC GGCTTTTGGC TCTCGCGAAT ATCATTGTTG CAACCCTGAC 
TGTACCCATA TCAAATATAT TCACCAAACC TGTAAATCTC GAGCGTGCAG TAGCTGTGGC
ATGAAAGCCA CAGAGCGATG GATACAAAAG CAACAACATG TCTTCCCTGA ATGCGAATAT
CAACACATCA CCTTTACCCT TCCAAACACG CTATGGCCTA TCTTTCGTCA TAACCGTTTG
TTAAATAAAT TATTCAAATG TGCTGCAAAC ATTCTGCTGG GATGGGCAAA AGATAAAGGA
ATAGATGTCG GTATCTTTTG TGCTCTTCAT ACTTACGGTC GAAAACTGAA TTGGAATACG
CACTTACATT TATCGGTCAC TCGTGGGGGA ATTTGTGAAC GTACCGGTTT ATGGAAACCC
ATTTACTTCC AAATGAAAAC GACAGAGCCT TGTTGGAGAG CGGCTATCGT CAGTTTATTG
GGTAAGGCTT ATGATGAGCT TGATTTATCA AGCGAAGAAT GCCCCTATAT CCATAATAAA
ACGGATTGGT CACGCTTTTT AAGCAGTCAA TATAATCGTC GTTGGAAGCT TCATTTTGCT
AAAAAGACAA ATAATGTAAA ACCGACGATG AACTATCTTG GTCGGTATTT AAAACGGCCC
CCGATTTCAG CGTCACGTTT AAGTCATTAC GCCAAAGGCG GAATGATAAC GTTTAATTAT
TTAGACCATC GAACAGGAAC AACAGACAGC CTAACATTAT CACCAGAAGA GATGATAAGA
CGGATAGTAG AGCACTATCC TGATAAACAT TTCAAGATGA TCCGATACTA CGGTTTTTTA
TCAATGCGTC GTCGTGGAGA AGCTCTGCCT AGAGTTTATG CAGCTTTAGG TATGACAATA
GAAGCTGAGC CGAAAATGCC AGGGTATGCC GCAATGTTAA AAGGATATGT AAAAGTAGAT
CCGTACGAAT GTATTTTATG TGAAAGTCGT CTGGTGTTTA CGAATTTCCG AGTCGGAAAT
TCGGTCAATG ATTTAGTCAC CCATGCGATA GTTCAGTCAG AATTGAGGGC AGCATAA
 
Protein sequence
MLSCGTAAFG SREYHCCNPD CTHIKYIHQT CKSRACSSCG MKATERWIQK QQHVFPECEY 
QHITFTLPNT LWPIFRHNRL LNKLFKCAAN ILLGWAKDKG IDVGIFCALH TYGRKLNWNT
HLHLSVTRGG ICERTGLWKP IYFQMKTTEP CWRAAIVSLL GKAYDELDLS SEECPYIHNK
TDWSRFLSSQ YNRRWKLHFA KKTNNVKPTM NYLGRYLKRP PISASRLSHY AKGGMITFNY
LDHRTGTTDS LTLSPEEMIR RIVEHYPDKH FKMIRYYGFL SMRRRGEALP RVYAALGMTI
EAEPKMPGYA AMLKGYVKVD PYECILCESR LVFTNFRVGN SVNDLVTHAI VQSELRAA