Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1720 |
Symbol | |
ID | 6987327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1829028 |
End bp | 1830104 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380035 |
Product | transposase |
Protein accession | YP_002263135 |
Protein GI | 209695206 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCCT GTGGGACAGC GGCTTTTGGC TCTCGCGAAT ATCATTGTTG CAACCCTGAC TGTACCCATA TCAAATATAT TCACCAAACC TGTAAATCTC GAGCGTGCAG TAGCTGTGGC ATGAAAGCCA CAGAGCGATG GATACAAAAG CAACAACATG TCTTCCCTGA ATGCGAATAT CAACACATCA CCTTTACCCT TCCAAACACG CTATGGCCTA TCTTTCGTCA TAACCGTTTG TTAAATAAAT TATTCAAATG TGCTGCAAAC ATTCTGCTGG GATGGGCAAA AGATAAAGGA ATAGATGTCG GTATCTTTTG TGCTCTTCAT ACTTACGGTC GAAAACTGAA TTGGAATACG CACTTACATT TATCGGTCAC TCGTGGGGGA ATTTGTGAAC GTACCGGTTT ATGGAAACCC ATTTACTTCC AAATGAAAAC GACAGAGCCT TGTTGGAGAG CGGCTATCGT CAGTTTATTG GGTAAGGCTT ATGATGAGCT TGATTTATCA AGCGAAGAAT GCCCCTATAT CCATAATAAA ACGGATTGGT CACGCTTTTT AAGCAGTCAA TATAATCGTC GTTGGAAGCT TCATTTTGCT AAAAAGACAA ATAATGTAAA ACCGACGATG AACTATCTTG GTCGGTATTT AAAACGGCCC CCGATTTCAG CGTCACGTTT AAGTCATTAC GCCAAAGGCG GAATGATAAC GTTTAATTAT TTAGACCATC GAACAGGAAC AACAGACAGC CTAACATTAT CACCAGAAGA GATGATAAGA CGGATAGTAG AGCACTATCC TGATAAACAT TTCAAGATGA TCCGATACTA CGGTTTTTTA TCAATGCGTC GTCGTGGAGA AGCTCTGCCT AGAGTTTATG CAGCTTTAGG TATGACAATA GAAGCTGAGC CGAAAATGCC AGGGTATGCC GCAATGTTAA AAGGATATGT AAAAGTAGAT CCGTACGAAT GTATTTTATG TGAAAGTCGT CTGGTGTTTA CGAATTTCCG AGTCGGAAAT TCGGTCAATG ATTTAGTCAC CCATGCGATA GTTCAGTCAG AATTGAGGGC AGCATAA
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Protein sequence | MLSCGTAAFG SREYHCCNPD CTHIKYIHQT CKSRACSSCG MKATERWIQK QQHVFPECEY QHITFTLPNT LWPIFRHNRL LNKLFKCAAN ILLGWAKDKG IDVGIFCALH TYGRKLNWNT HLHLSVTRGG ICERTGLWKP IYFQMKTTEP CWRAAIVSLL GKAYDELDLS SEECPYIHNK TDWSRFLSSQ YNRRWKLHFA KKTNNVKPTM NYLGRYLKRP PISASRLSHY AKGGMITFNY LDHRTGTTDS LTLSPEEMIR RIVEHYPDKH FKMIRYYGFL SMRRRGEALP RVYAALGMTI EAEPKMPGYA AMLKGYVKVD PYECILCESR LVFTNFRVGN SVNDLVTHAI VQSELRAA
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