| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1701 |
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| Symbol | |
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| ID | 6988680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1799568 |
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| End bp | 1800635 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643380023 |
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| Product | outer membrane protein, OmpA family |
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| Protein accession | YP_002263123 |
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| Protein GI | 209695194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.908317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATATC TTCATCTATG GATTACATTC TTATTTATTT CATTCTCTCA ATGTTCTTAT
GCAACAGCAG AATTGCCTAC ATCAACCCAG TCAAATATCA ATACTGAATT TTCTAATTCT
ACCTTATTGC CCGATAATGG CGATTATTGG TATGTTGGTA CCAAATTAGG TTTAAGTGTA
TACCAATATG GTTGTGAGGA ATGGTCAATT GATTGTGATA GAACAGATTT AGGCGGAGGT
TTCTTTGTTG GCTATCAAAT CAACGAAAGC TGGGGAATTG AGCTAGGTAA GACTTTCTTA
GGGGCTGCTA AAGCAGAGTA TTTTTCAAGA AAAGTAACAG GAGATATGGA GACAATTGAT
CTTTTCGGTA AGTATACCTA CGGTCTGACT GATCGTTTTG GTTTTTTTGG CAAAGCTGGT
CTCGCAAACT GGAACGGGAA AACAAAATCT GATTATGTTG AGACAACTAC GTTTGGGCAT
GATTTATCTG TTGGATTTGG AGCTCAATAT GCCCTAAATA AACGTTGGCT TACTCAGCTT
GAATATCAAT ATATAAACAG CATTGGGGAT GATACTGTCG GTGAATCTGA TTACCACCTT
ATGAGTATAG GTATCATTTA TCGATTTGGT TTTCATGAGC TAAAACAACC TTTCTCATGC
CCGATCCCTA ATGAACGTCA AATTATTACC GCTTATGTAG ATGATGAGCT TTTTGATAGC
AACAGCACAA CCATCACTAA ACCAGAACTA CTTGATCCTT TTATTGCTCG ACTTCACTAT
TACTCTGAGT CAACACTTTC TATTATTGGT CATACTGATG CTATCGGTTC CGAGGCTTAT
AACCAATCAT TATCAGAGAA AAGAGCGGAA TCAGTGGCTA AATATTTCAT AAAATCTGGA
ATATCAAATA ACCGTATATC CACCCAAGGC CGCGGTGAAA AAGACCCCAT TGCTCCCAAT
AATACACAAA ATGGTCGTTA TTTAAATCGC CGAGTTGAAC TACGATCTAA TTCATTTCTT
TATATCCCTA ATAAAAAATT AATTACTCAA CATCAAGAGA ATAACTAA
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| Protein sequence | MSYLHLWITF LFISFSQCSY ATAELPTSTQ SNINTEFSNS TLLPDNGDYW YVGTKLGLSV
YQYGCEEWSI DCDRTDLGGG FFVGYQINES WGIELGKTFL GAAKAEYFSR KVTGDMETID
LFGKYTYGLT DRFGFFGKAG LANWNGKTKS DYVETTTFGH DLSVGFGAQY ALNKRWLTQL
EYQYINSIGD DTVGESDYHL MSIGIIYRFG FHELKQPFSC PIPNERQIIT AYVDDELFDS
NSTTITKPEL LDPFIARLHY YSESTLSIIG HTDAIGSEAY NQSLSEKRAE SVAKYFIKSG
ISNNRISTQG RGEKDPIAPN NTQNGRYLNR RVELRSNSFL YIPNKKLITQ HQENN
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