| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1687 |
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| Symbol | aspC |
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| ID | 6989045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1782903 |
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| End bp | 1784102 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380010 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_002263110 |
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| Protein GI | 209695181 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.262918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTA TGTTTGAAAA AATCTCTGCC GCTCCAGCTG ATCCAATTCT TGGCCTAACT
GATGAATTTA AAAATGACCC TCGTGCTGAA AAAATCAACT TAGGTGTTGG TATTTATAAG
AACGAAGCGG GTCAGACTCC AGTATTGAAA ACAGTAAAAA AAGCAGAAGC TGTATTGCTT
GATACTGAAA AAACAAAGTC ATATTTAACC ATCCAAGGTA CTGCAGAATA CGGCCTAGCC
GTTCAAAAAC TGTTGTTTGG CAATAACGCT GATGTCATTA CAGAAAAACG CACTCAAACA
GCACAAGCGC CTGGTGGTAC TGGTGCACTT CGTGTAGCTG GTGAATTCAT TAAACGCCAA
TTAGGCAATG TGAAAATTTG GATCAGTAAC CCAACATGGG CAAACCACAT TGGTGTATTT
ACTGCTGCTG GTATCGAAAC TGCACAATAC AGCTACTACA ACGCAGAAAC TAAATCGAAA
GATTTCGCTG CAATGATGGC AGATTTACAA CAAGCAGAAT CTGGTGATGT TGTATTACTG
CACGGATGTT GTCACAACCC AACAGGTATT GATCCAACAG ATGCTGAATG GGAAGAACTA
GCAAAATTAT GTGCAAATAA AGGATTATTA CCACTGTTTG ATTTTGCGTA CCAAGGTTTT
GCTAAAGGCG TTGAAGAAGA TGCTTCTGGT CTTCGTACTT TTGCTCAATA CTGCCCAGAA
TTACTTGTTG CGAGTTCGTT CTCTAAAAAC TTCGGTTTAT ACAATGAACG TGTCGGTGCA
TTTACGCTGG TAGCTAAAGA CCCTGAAGTT TCTGTTACTG CGTTCTCACA AGTGAAAGCA
ATTATTCGCT CTATTTACTC TAACCCACCA GCTCATGGTG CCGCTGTCGT TACTTACATC
TTAAATGATG ATGCGTTGCG TACTGAGTGG GAACAAGAAG TACAAGAAAT GCGAGCTCGT
ATTCAAGAGA TGCGTACTCT GTTTGTTACC ACTCTAAAAG AGCAAGGCGT AGACGCTAAT
TTCAGCTTTA TTGAACGTCA AAATGGCATG TTCTCTTTCT CTGGTCTGTC TAAAGAACAA
GTGAATCGCC TAAAAGATGA GTTTGCAATT TACATCGTTG GTTCAGGTCG AATCAGTGTT
GCTGGTATGA CGAAAGACAA CATGCTGCCA TTATGTAAAG GCATTGCCGC TGTTCTTTAA
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| Protein sequence | MMTMFEKISA APADPILGLT DEFKNDPRAE KINLGVGIYK NEAGQTPVLK TVKKAEAVLL
DTEKTKSYLT IQGTAEYGLA VQKLLFGNNA DVITEKRTQT AQAPGGTGAL RVAGEFIKRQ
LGNVKIWISN PTWANHIGVF TAAGIETAQY SYYNAETKSK DFAAMMADLQ QAESGDVVLL
HGCCHNPTGI DPTDAEWEEL AKLCANKGLL PLFDFAYQGF AKGVEEDASG LRTFAQYCPE
LLVASSFSKN FGLYNERVGA FTLVAKDPEV SVTAFSQVKA IIRSIYSNPP AHGAAVVTYI
LNDDALRTEW EQEVQEMRAR IQEMRTLFVT TLKEQGVDAN FSFIERQNGM FSFSGLSKEQ
VNRLKDEFAI YIVGSGRISV AGMTKDNMLP LCKGIAAVL
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