| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1684 |
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| Symbol | cdd |
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| ID | 6987299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1779190 |
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| End bp | 1780098 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643380007 |
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| Product | cytidine deaminase |
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| Protein accession | YP_002263107 |
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| Protein GI | 209695178 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.244937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACTC TACATAAGAA CGCCCTACAA CAACGCTTAC AAGAAGCCAT GGATACCCTT
CCTTCTTCTC TTAATACAGC GATCGCCCCT TTAGTTAATG AGCAATTCAC TGGCGTTATC
ACTCAAGATC AATTCCAAGC ATTATTGGCT CAAAGTCAAT TAACGGATAA AGAATTAAGA
TTAGCGCTGC TTCCTTTAGC GGCGGCATTT TCTGTTGCTC CTATTTCTAA TTTCTATGTT
GGAGCGATTG CTCGCGGCAC CTCTGGACAC TTATATTTTG GTGCCAACAT GGAATTCAGT
AATGTTCAAT TAGGCCAAAC TATTCATGCT GAACAATCTG CAATCAGCCA TGCATGGATT
CATGGTGAAA CAGGGATTTC AGACATCACG ATCAACTTCA GCCCATGTGG GCATTGTCGT
CAATTTATGA ATGAGTTAAC AACGGCCGAT TCATTAATGG TGCAATTACC AGAACGTGAT
GAAAAATCTC TGCAAGCGTA TTTACCAGAA TCGTTTGGTC CTAAAGACTT AGGTGTTGAA
GGTGGTTTGT TAGCCACAAC ATCACATAAA CTGAACTTTG AATCGACATC TCCATTACTA
ATGCAAGCAT TTGATGCTGC AAATCGTAGC CACGCCCCTT ATTCAAAAAA CTTTAGTGGT
GTCGCTTTAG AAATGAATAA CGGTAATATC TACCACGGTA TGTACGCGGA AAACGCAGCA
TTTAACCCGA GTTTACCCCC ACTTCAAGTC GCATTAATTC ATGCAAATAT GTCTCGCGAA
GCCTTATCTG AAATCAAAAA AGCGGCATTG GTTGAAGATC ACAAAGGGGC AATCAGTCAT
TTAGCGATTA CGACCTGTAC TCTTAAAGAT CTGAGTCCAA ACATGATATT AGAATACGTG
TCTTTATAG
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| Protein sequence | MTTLHKNALQ QRLQEAMDTL PSSLNTAIAP LVNEQFTGVI TQDQFQALLA QSQLTDKELR
LALLPLAAAF SVAPISNFYV GAIARGTSGH LYFGANMEFS NVQLGQTIHA EQSAISHAWI
HGETGISDIT INFSPCGHCR QFMNELTTAD SLMVQLPERD EKSLQAYLPE SFGPKDLGVE
GGLLATTSHK LNFESTSPLL MQAFDAANRS HAPYSKNFSG VALEMNNGNI YHGMYAENAA
FNPSLPPLQV ALIHANMSRE ALSEIKKAAL VEDHKGAISH LAITTCTLKD LSPNMILEYV
SL
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